CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
EDL38120.1
(
Mus musculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
EDL38120.1
T085689_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
EDL38120.1
M00127_2.00
Mus musculus
RTGTGCRC
GYGCACAY
PBM
Badis et al.(2009)
Zscan4_2667
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00127_2.00
C2H2 ZF
16
38
YKCEECPRTFKYPCNLSIHQKTH
M00127_2.00
C2H2 ZF
44
66
FFCKECQIGFYQKSELHDHEVIH
M00127_2.00
C2H2 ZF
72
94
FACSTCGRAFRYKTNLQAHERIH
M00127_2.00
C2H2 ZF
100
123
YSCSLCNSSFRQSSTFHRHLRKFH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDL38120.1
C2H2 ZF
397
419
YKCEECPRTFKYPCNLSIHQKTH
EDL38120.1
C2H2 ZF
425
447
FFCKECQIGFYQKSELHDHEVIH
EDL38120.1
C2H2 ZF
453
475
FACSTCGRAFRYKTNLQAHERIH
EDL38120.1
C2H2 ZF
481
504
YSCSLCNSSFRQSSTFHRHLRKFH
Links
Other
C2H2 ZF
family TFs
Other
Mus musculus
TFs
0 Related TFs
">No related TF found