Prdm9 (Mus musculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMUSG00000051977 T101279_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Prdm9
M09007_2.00		 Mus musculus
HRNDDGGYAGYAVCWBCWB
VWGVWGBTRCTRCCHHNYD		 Misc
Kulakovskiy et al.(2013)
PRDM9_MOUSE.H11MO.0.C		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000131871 C2H2 ZF 516 535
ENSMUSP00000131871 C2H2 ZF 541 563
ENSMUSP00000131871 C2H2 ZF 569 591
ENSMUSP00000131871 C2H2 ZF 597 619
ENSMUSP00000131871 C2H2 ZF 625 647
ENSMUSP00000131871 C2H2 ZF 653 675
ENSMUSP00000131871 C2H2 ZF 681 703
ENSMUSP00000131871 C2H2 ZF 709 731
ENSMUSP00000131871 C2H2 ZF 737 759
ENSMUSP00000131871 C2H2 ZF 765 787
ENSMUSP00000131871 C2H2 ZF 793 815
ENSMUSP00000131871 C2H2 ZF 821 843

Links

Other C2H2 ZF family TFs
Other Mus musculus TFs

0 Related TFs

">No related TF found