CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

LOC100909824 *(Rattus norvegicus)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	ENSRNOG00000046338	T109254_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSRNOP00000065360	C2H2 ZF	166	188	YECKECGKAFRLPQQLTRHQKSH
ENSRNOP00000065360	C2H2 ZF	194	216	FKCNECGKAFHLPGLLKYHKTIH
ENSRNOP00000065360	C2H2 ZF	222	244	FECEECGKSFNCVSHLVEHRTIH
ENSRNOP00000065360	C2H2 ZF	250	272	YECNDCGKAFKRHSYLMQHQKIH
ENSRNOP00000065360	C2H2 ZF	278	300	FQCKECGKAFTVLPQLTQHQNTH
ENSRNOP00000065360	C2H2 ZF	305	327	FECKQCGKIFSGGFYLVRHQSIH
ENSRNOP00000065360	C2H2 ZF	333	355	FECNVCGKAFRLQVYLNEHQKTH
ENSRNOP00000065360	C2H2 ZF	361	383	FKCKLCESAFRRKYQLSEHQKIH
ENSRNOP00000065360	C2H2 ZF	389	411	YQCKDCGKFFRRRSNFTEHQSIH
ENSRNOP00000065360	C2H2 ZF	417	439	FECKQCGKVFRLNIHLIRHQSFH
ENSRNOP00000065360	C2H2 ZF	445	467	FECNECGKGFHFSSQLNYHKTIH
ENSRNOP00000065360	C2H2 ZF	473	495	FECEKCGKSFKRVCSLLEHRVIH
ENSRNOP00000065360	C2H2 ZF	501	523	YECSECGKTFNRRSNLVQHQKIH
ENSRNOP00000065360	C2H2 ZF	529	551	FECKECGKGFTVLAQLTRHQTIH
ENSRNOP00000065360	C2H2 ZF	557	579	FECEQCGSAFRLQYQLTQHQRIH
ENSRNOP00000065360	C2H2 ZF	585	607	FECKECGKGFVRGTALRIHERIH

Links
Other C2H2 ZF family TFs
Other *Rattus norvegicus* TFs

0 Related TFs

">No related TF found