ztf-28 (Caenorhabditis elegans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00018099 T131627_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in intestine. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ztf-28
M01867_2.00		 Caenorhabditis elegans
VRGCTTHWNN
NNWDAAGCYB		 PBM
Weirauch et al.(2014)
pTH9059		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01867_2.00 C2H2 ZF 40 63
M01867_2.00 C2H2 ZF 67 90
M01867_2.00 C2H2 ZF 96 117

DNA Binding Domains

Protein ID Domain From To Sequence
F36F12.8 C2H2 ZF 40 63
F36F12.8 C2H2 ZF 67 90
F36F12.8 C2H2 ZF 96 117

Links

Other C2H2 ZF family TFs
Other Caenorhabditis elegans TFs

0 Related TFs

">No related TF found