CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG000288.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG000288.1
T132951_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG000288.1
C2H2 ZF
155
176
HHYTKCGKSFRQPSNMARHTLM
Alligator_sinensis_CCG000288.1
C2H2 ZF
183
205
HQCSVCGKRFTQPSHLAKHQCIH
Alligator_sinensis_CCG000288.1
C2H2 ZF
239
261
YLCSDCGKSFTHPSHLAKHQLIH
Alligator_sinensis_CCG000288.1
C2H2 ZF
267
289
HQCSVCGKSFTQSPHLTQHQRIH
Alligator_sinensis_CCG000288.1
C2H2 ZF
295
317
HQCPVCGKSFGQSSTLAQHQRIH
Alligator_sinensis_CCG000288.1
C2H2 ZF
323
345
HLCSVCGKSFSRSSTLARHQLIH
Alligator_sinensis_CCG000288.1
C2H2 ZF
351
373
HQCSACGKSFTQSSHLAQHQRIH
Alligator_sinensis_CCG000288.1
C2H2 ZF
379
401
HQCSVCGKGFIHSSRLAEHRHIH
Alligator_sinensis_CCG000288.1
C2H2 ZF
407
429
HQCSVCGKCFTQSSSLAKHQHLH
Alligator_sinensis_CCG000288.1
C2H2 ZF
435
457
HQCPVCGKSFSCSSTLAQHQLIH
Alligator_sinensis_CCG000288.1
C2H2 ZF
463
485
YQCSVCGKSFTRSSTLARHQRIH
Alligator_sinensis_CCG000288.1
C2H2 ZF
491
513
HQCFVCGKSFTQSSILVQHQRIH
Alligator_sinensis_CCG000288.1
C2H2 ZF
519
541
HQCSECGKSFTHSSSLAQHHRIH
Alligator_sinensis_CCG000288.1
C2H2 ZF
547
569
HQCSVCGKSFTQSSNLAKHQRIH
Alligator_sinensis_CCG000288.1
C2H2 ZF
575
597
HQCSVCGKNFSCSSTLAQHQCIH
Alligator_sinensis_CCG000288.1
C2H2 ZF
603
625
HQCSECQKSFTHSSSLAYHQLMH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found