CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG001120.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG001120.1
T132968_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG001120.1
C2H2 ZF
43
64
YHCPDCGKSFSNSSDHLRHLRI
Alligator_sinensis_CCG001120.1
C2H2 ZF
71
93
YHCLDCRTSFRLSSHLTRHQRSH
Alligator_sinensis_CCG001120.1
C2H2 ZF
99
121
YKCLVCRESYTDSSGLIKHKWIH
Alligator_sinensis_CCG001120.1
C2H2 ZF
143
165
YQCPDCGKAFTVKLVLIKHKTMH
Alligator_sinensis_CCG001120.1
C2H2 ZF
171
193
YNCSKCEKSFSHSSALMKHQRIH
Alligator_sinensis_CCG001120.1
C2H2 ZF
199
216
FKCPDCGKRYNDSSTLIS
Alligator_sinensis_CCG001120.1
C2H2 ZF
323
345
HKCPECGQSFSESSDLRVHQRLH
Alligator_sinensis_CCG001120.1
C2H2 ZF
351
373
YKCMECGKIFNRRSFLITHQRIH
Alligator_sinensis_CCG001120.1
C2H2 ZF
379
401
YKCPDCGKSFRVRSTLIKHKRIH
Alligator_sinensis_CCG001120.1
C2H2 ZF
407
429
YKCHDCGKNFRLSSTLSTHRKIH
Alligator_sinensis_CCG001120.1
C2H2 ZF
435
457
YECLVCGKSFRVSSYLLAHEATH
Alligator_sinensis_CCG001120.1
C2H2 ZF
463
485
FKCPDCGKHFSVSRDLIVHQRIH
Alligator_sinensis_CCG001120.1
C2H2 ZF
491
513
FQCTDCGKTFNRRSTLIVHQRIH
Alligator_sinensis_CCG001120.1
C2H2 ZF
519
541
YKCPDCGKSFIVSSDLIAHQRIH
Alligator_sinensis_CCG001120.1
C2H2 ZF
547
569
YHCLDCGKSFRLSSLLPRHQRSH
Alligator_sinensis_CCG001120.1
C2H2 ZF
575
597
YKCLVCGESYTDSSGLIKHKRIH
Alligator_sinensis_CCG001120.1
C2H2 ZF
619
641
YKCLVCRKTFTVKSALIKHTTMH
Alligator_sinensis_CCG001120.1
C2H2 ZF
647
669
YKCPECEKSFSHSSALMKHQRIH
Alligator_sinensis_CCG001120.1
C2H2 ZF
675
697
FKCPDCGKRYNDSSTLRRHRRTH
Alligator_sinensis_CCG001120.1
C2H2 ZF
703
725
YKCPDCGERFCMNSALVRHQRVH
Alligator_sinensis_CCG001120.1
C2H2 ZF
731
753
YKCPECGKSFQSNSLLVTHQRIH
Alligator_sinensis_CCG001120.1
C2H2 ZF
759
781
YACPVCGKRFRQSSHLIRHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found