CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG001121.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG001121.1
T132969_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG001121.1
C2H2 ZF
100
122
HKCPSCMKCFSLRSALTKHQRIH
Alligator_sinensis_CCG001121.1
C2H2 ZF
128
150
FKCPQCEKCFNRRSILVTHQRIH
Alligator_sinensis_CCG001121.1
C2H2 ZF
156
178
YSCPECKKSFSVRSTLIKHQRSH
Alligator_sinensis_CCG001121.1
C2H2 ZF
184
206
YKCLDCGKSFSDSSAFIKHKRIH
Alligator_sinensis_CCG001121.1
C2H2 ZF
212
234
YTCSECGQRFSVSSDLIVHQRIH
Alligator_sinensis_CCG001121.1
C2H2 ZF
240
262
YKCPDCGKSFGLSSHLTRHQRIH
Alligator_sinensis_CCG001121.1
C2H2 ZF
268
290
YTCPDCGKSFRLSSTLSTHRKIH
Alligator_sinensis_CCG001121.1
C2H2 ZF
296
318
YQCPKCEKSFRVSSYLLTHERTH
Alligator_sinensis_CCG001121.1
C2H2 ZF
324
346
YKCPDCGKSFGVSSALIKHQTIH
Alligator_sinensis_CCG001121.1
C2H2 ZF
352
374
FKCSDCGKSFNRRSVLTTHRRIH
Alligator_sinensis_CCG001121.1
C2H2 ZF
380
402
YVCHDCGKSFIRSSDLTAHQRVH
Alligator_sinensis_CCG001121.1
C2H2 ZF
408
430
FKCPDCGKGFGMNSALVKHQRVH
Alligator_sinensis_CCG001121.1
C2H2 ZF
436
458
YQCLECGKGFKQKPALVTHQGIH
Alligator_sinensis_CCG001121.1
C2H2 ZF
464
486
HKCADCGKSFSVNSALMVHRRTH
Alligator_sinensis_CCG001121.1
C2H2 ZF
492
514
YTCPSCGKIFSDSSGLIKHQRSH
Alligator_sinensis_CCG001121.1
C2H2 ZF
520
542
YKCPDCGKSYGDSSAFIKHKTLH
Alligator_sinensis_CCG001121.1
C2H2 ZF
548
570
YKCPDCGKSFSHSSALMKHQRIH
Alligator_sinensis_CCG001121.1
C2H2 ZF
576
598
FKCPECGTRFTDSSALRRHQRIH
Alligator_sinensis_CCG001121.1
C2H2 ZF
604
626
HKCPDCGKRFRVNSALVKHQRFH
Alligator_sinensis_CCG001121.1
C2H2 ZF
735
757
YSCPECEKSFSRSSALIIHLRTH
Alligator_sinensis_CCG001121.1
C2H2 ZF
763
785
YECPDCGKSFSHSSVLIIHTRTH
Alligator_sinensis_CCG001121.1
C2H2 ZF
791
813
YECPDCGKSFPQRAYLAVHRRIH
Alligator_sinensis_CCG001121.1
C2H2 ZF
819
841
YKCPDCGKSFSSSSYLISHQIIH
Alligator_sinensis_CCG001121.1
C2H2 ZF
847
869
YKCPDCGKGFNRRSSVSRHRKTH
Alligator_sinensis_CCG001121.1
C2H2 ZF
875
897
YECLDCGKKFIQKSNLISHQRRH
Alligator_sinensis_CCG001121.1
C2H2 ZF
903
925
YTCPECGKHFRQRSQYTVHKRSH
Alligator_sinensis_CCG001121.1
C2H2 ZF
931
953
CKCPDCGESFKQSSELRSHQRVH
Alligator_sinensis_CCG001121.1
C2H2 ZF
959
981
YKCPECEKSFYDGSDLMKHQRIH
Alligator_sinensis_CCG001121.1
C2H2 ZF
987
1008
YKCPDCGKRFRSSSHLFRHQGL
Alligator_sinensis_CCG001121.1
C2H2 ZF
1015
1037
YGCPECGKNFSMSSHMTKHLRTH
Alligator_sinensis_CCG001121.1
C2H2 ZF
1043
1065
YECSECGKKFTQRSVLIRHQRVH
Alligator_sinensis_CCG001121.1
C2H2 ZF
1071
1093
YNCTKCEKNFSQSSTLTRHQRTH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found