CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG001122.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG001122.1
T132970_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG001122.1
C2H2 ZF
103
125
SECPECGKRFTQRSNLMRHQRVH
Alligator_sinensis_CCG001122.1
C2H2 ZF
131
153
YNCSDCKKSFNQVSNLIVHQRIH
Alligator_sinensis_CCG001122.1
C2H2 ZF
159
181
YKCPKCGRSFKQSSDLLKHQRIH
Alligator_sinensis_CCG001122.1
C2H2 ZF
187
209
YGCPDCGKTFKLSSELISHHTVH
Alligator_sinensis_CCG001122.1
C2H2 ZF
215
237
YKCPECGKYFAYLSSLISHQRTH
Alligator_sinensis_CCG001122.1
C2H2 ZF
243
265
HECPDCGKSFHQKAYLAVHQRIH
Alligator_sinensis_CCG001122.1
C2H2 ZF
271
293
YKCPDCGKTFSQNSNFIKHQRIH
Alligator_sinensis_CCG001122.1
C2H2 ZF
299
321
YKCLDCGKSFTLRSDLYTHRTVH
Alligator_sinensis_CCG001122.1
C2H2 ZF
327
349
YSCLECGKYFASFSALISHRRIH
Alligator_sinensis_CCG001122.1
C2H2 ZF
355
377
YKCPDCEKGFKQSSSLSKHRRIH
Alligator_sinensis_CCG001122.1
C2H2 ZF
383
405
YKCPDCSKSFTQKSNLVSHRRTH
Alligator_sinensis_CCG001122.1
C2H2 ZF
411
433
YKCLECGKSFSLSSNLASHQRVH
Alligator_sinensis_CCG001122.1
C2H2 ZF
439
461
YKCPNCGKCFKQRSNLIVHQRTH
Alligator_sinensis_CCG001122.1
C2H2 ZF
467
489
YKCPECGESFKQSCEVISHRRIH
Alligator_sinensis_CCG001122.1
C2H2 ZF
495
517
YKCPECEKSFYDGSSLMKHQRIH
Alligator_sinensis_CCG001122.1
C2H2 ZF
523
545
YKCPDCGKSFCNSSHLRRHQRIH
Alligator_sinensis_CCG001122.1
C2H2 ZF
551
573
YRCPECGKSFSQSSALVVHQRTH
Alligator_sinensis_CCG001122.1
C2H2 ZF
579
601
YKCPDCGKSYKAKVSLVSHQKLH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found