CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG003040.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG003040.1
T133006_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG003040.1
C2H2 ZF
211
233
YQCLECGKNFTRYTYLVRHQLIH
Alligator_sinensis_CCG003040.1
C2H2 ZF
239
261
HRCSDCGKSFTHSSGLTQHKLIH
Alligator_sinensis_CCG003040.1
C2H2 ZF
267
289
HRCLECGKSFTRSSALSLHQLVH
Alligator_sinensis_CCG003040.1
C2H2 ZF
295
317
HQCSECGKSFAQSSYLTKHWLVH
Alligator_sinensis_CCG003040.1
C2H2 ZF
323
345
YHCPECGKSFTRSTYLAQHQLIH
Alligator_sinensis_CCG003040.1
C2H2 ZF
351
373
HRCSVCGKSFTHSSALGQHKLIH
Alligator_sinensis_CCG003040.1
C2H2 ZF
379
401
HQCSECGKSFTHSSALSQHKLIH
Alligator_sinensis_CCG003040.1
C2H2 ZF
407
429
HQCSECGKSFAQSSYLIQHWVVH
Alligator_sinensis_CCG003040.1
C2H2 ZF
435
457
YQCLVCGKSFKRSSNLARHQLVH
Alligator_sinensis_CCG003040.1
C2H2 ZF
463
485
YQCSECGKSFTLSSSLVRHQLIH
Alligator_sinensis_CCG003040.1
C2H2 ZF
491
513
HQCLECGKCFTQSCQLTKHQLIH
Alligator_sinensis_CCG003040.1
C2H2 ZF
519
541
HQCSECGKSFNRSCTLAQHQLIH
Alligator_sinensis_CCG003040.1
C2H2 ZF
547
569
HRCLECGKSFNRSSNLVQHQLIH
Alligator_sinensis_CCG003040.1
C2H2 ZF
575
597
HQCSECGKSFILSSSLTKHWFTH
Alligator_sinensis_CCG003040.1
C2H2 ZF
603
625
HQCSECGKSFTRSFDLSRHQLIH
Alligator_sinensis_CCG003040.1
C2H2 ZF
631
652
HQCSECGKCFLHSSKLAQHQCI
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found