CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG003482.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG003482.1
T133022_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG003482.1
C2H2 ZF
194
216
YPCPICGRTFKQKSDLTLHQRIH
Alligator_sinensis_CCG003482.1
C2H2 ZF
222
244
YKCPDCGKGFSQNSNLRKHQRIH
Alligator_sinensis_CCG003482.1
C2H2 ZF
250
272
YRCLECGKDFARSWSLVLHRRVH
Alligator_sinensis_CCG003482.1
C2H2 ZF
278
300
YKCPDCGKDFARFSSLILHWRVH
Alligator_sinensis_CCG003482.1
C2H2 ZF
306
328
YSCPECGMGFTQSSHLISHRRVH
Alligator_sinensis_CCG003482.1
C2H2 ZF
334
356
YKCPDCGKGFNHRSDLIRHRRVH
Alligator_sinensis_CCG003482.1
C2H2 ZF
362
384
YKCPDCGMGFTQSVHLSSHRRVH
Alligator_sinensis_CCG003482.1
C2H2 ZF
390
412
YKCPDCGKGFNHNSDLICHQRVH
Alligator_sinensis_CCG003482.1
C2H2 ZF
418
440
YQCSDCGKSFTQRSTLSSHQRVH
Alligator_sinensis_CCG003482.1
C2H2 ZF
446
468
YCCPDCRKSFKKRSQLISHRRVH
Alligator_sinensis_CCG003482.1
C2H2 ZF
474
496
YCCPDCGKVFKQRSVLISHQRVH
Alligator_sinensis_CCG003482.1
C2H2 ZF
502
524
YKCPDCGVGFTQRTNLSSHRRVH
Alligator_sinensis_CCG003482.1
C2H2 ZF
530
552
YKCPDCGKGFRQISNLNDHQKNH
Alligator_sinensis_CCG003482.1
C2H2 ZF
558
580
YRCPECGKSFKWSSGLISHRKIH
Alligator_sinensis_CCG003482.1
C2H2 ZF
769
791
YKCPDCGKGFSRTSNLRKHQRVH
Alligator_sinensis_CCG003482.1
C2H2 ZF
797
819
YRCLECGTSFMGSSSLVTHQKVH
Alligator_sinensis_CCG003482.1
C2H2 ZF
825
847
YSCPDCGKGFKHRWDLIRHQRVH
Alligator_sinensis_CCG003482.1
C2H2 ZF
853
875
YSCPDCGMGFTQSVHLRSHRRVH
Alligator_sinensis_CCG003482.1
C2H2 ZF
881
903
YKCADCGKGFNNNSILVCHQRIH
Alligator_sinensis_CCG003482.1
C2H2 ZF
909
931
YKCPDCGIGFKQYSSLSSHRRVH
Alligator_sinensis_CCG003482.1
C2H2 ZF
937
959
HKCPDCGKGFKERVQLSVHRRVH
Alligator_sinensis_CCG003482.1
C2H2 ZF
965
987
YKCPDCGKDFKQRSALISHQRVH
Alligator_sinensis_CCG003482.1
C2H2 ZF
993
1015
YKCPDCGRGFSHRWNLNDHQKSH
Alligator_sinensis_CCG003482.1
C2H2 ZF
1021
1043
YSCPDCGKSFKRSSGLVSHQKIH
Alligator_sinensis_CCG003482.1
C2H2 ZF
1049
1071
YTCPECGKSFSERSYLVIHQRIH
Alligator_sinensis_CCG003482.1
C2H2 ZF
1077
1099
YTCSACGKSFSQRSYLIRHQGIH
Alligator_sinensis_CCG003482.1
C2H2 ZF
1103
1125
YRCPECGKSFSKRSALVLHESIH
Alligator_sinensis_CCG003482.1
C2H2 ZF
1131
1153
YMCTVCGKTYMAKGSLTSHQKLH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found