CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG003721.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG003721.1
T133040_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG003721.1
C2H2 ZF
274
296
YICRECGESFGDKEELRAHGRTH
Alligator_sinensis_CCG003721.1
C2H2 ZF
302
324
YPCAECGKSFQHKYSLRRHQRLH
Alligator_sinensis_CCG003721.1
C2H2 ZF
330
352
HLCPKCGESFVSLSDVRLHQRVH
Alligator_sinensis_CCG003721.1
C2H2 ZF
358
380
YCCTQCRKSFTRWDRLQGHGRVH
Alligator_sinensis_CCG003721.1
C2H2 ZF
386
408
FSCSHCGKRFTESSTLTQHLRVH
Alligator_sinensis_CCG003721.1
C2H2 ZF
414
436
FSCTQCGKSFTDSSKLTSHLRVH
Alligator_sinensis_CCG003721.1
C2H2 ZF
442
464
FSCTQCGKSFTHSSTLKRHRRLH
Alligator_sinensis_CCG003721.1
C2H2 ZF
470
492
FFCTQCGKSFTDSSKLTSHLRVH
Alligator_sinensis_CCG003721.1
C2H2 ZF
498
520
FSCSQCGKSFTTGSTLTQHQRVH
Alligator_sinensis_CCG003721.1
C2H2 ZF
526
548
FSCPQCGKSFAHNSTLTKHLRVH
Alligator_sinensis_CCG003721.1
C2H2 ZF
554
576
YGCVECGKCFRQSAALTKHLRTH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found