CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG003724.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG003724.1
T133041_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG003724.1
C2H2 ZF
373
395
YQCITCGKTFTQFFSLAQHRHVH
Alligator_sinensis_CCG003724.1
C2H2 ZF
429
451
HHCTKYGKRFRRPSDLAQHRCLH
Alligator_sinensis_CCG003724.1
C2H2 ZF
485
505
CSDSGKSFTRPSHLARHHLVH
Alligator_sinensis_CCG003724.1
C2H2 ZF
511
533
YQCPECGKSFTQSSRLAQHQRIH
Alligator_sinensis_CCG003724.1
C2H2 ZF
541
561
CPECGKSFSRSSSLARHQLIH
Alligator_sinensis_CCG003724.1
C2H2 ZF
567
589
HQCSVCGKSFTQSSTLVQHQRVH
Alligator_sinensis_CCG003724.1
C2H2 ZF
595
617
HRCSECGKSFTQSSSLGRHQDLH
Alligator_sinensis_CCG003724.1
C2H2 ZF
622
644
HQCLVCGKSFTHSCHLARHQRIH
Alligator_sinensis_CCG003724.1
C2H2 ZF
650
671
YRCSGCGKSFILSSSLARHQRR
Alligator_sinensis_CCG003724.1
C2H2 ZF
677
699
DQCLVCGERFTLSCHLAEHQRIH
Alligator_sinensis_CCG003724.1
C2H2 ZF
705
727
HQCSECGKSFTESSSLAQHQRIH
Alligator_sinensis_CCG003724.1
C2H2 ZF
733
755
HQCSECGKRFTQASHLARHQLTH
Alligator_sinensis_CCG003724.1
C2H2 ZF
761
783
HRCSECGKSFTQPYSLSQHQRIH
Alligator_sinensis_CCG003724.1
C2H2 ZF
789
811
YQCSECGKGFTQSSHLARHQRIH
Alligator_sinensis_CCG003724.1
C2H2 ZF
817
839
YQCSECGRSFTQSSHLARHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found