CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG003778.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG003778.1
T133042_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG003778.1
C2H2 ZF
409
431
HMCPECKRCFKKRTHLVEHLHLH
Alligator_sinensis_CCG003778.1
C2H2 ZF
437
458
LQCPNCGKFFTSKSKLKIHLLR
Alligator_sinensis_CCG003778.1
C2H2 ZF
465
488
HRCPLCQYRSVERNALNRHMASMH
Alligator_sinensis_CCG003778.1
C2H2 ZF
499
521
YACPVCQEPFKLSQALKEHLKSH
Alligator_sinensis_CCG003778.1
C2H2 ZF
643
665
HKCGECGFATAHKRVLMRHALLH
Alligator_sinensis_CCG003778.1
C2H2 ZF
671
693
HKCEQCDFTCRDVSYLSKHMLTH
Alligator_sinensis_CCG003778.1
C2H2 ZF
699
721
FMCTECGYVTKWKHYLNVHMRKH
Alligator_sinensis_CCG003778.1
C2H2 ZF
727
749
YQCNQCSYRCHRADQLSSHKLRH
Alligator_sinensis_CCG003778.1
C2H2 ZF
754
777
LMCEVCGFACKRKYELQKHAQAKH
Alligator_sinensis_CCG003778.1
C2H2 ZF
786
806
FQCRYCSYQSKYKQALRSHEN
Alligator_sinensis_CCG003778.1
C2H2 ZF
1394
1416
HQCPYCEFSTTRRYRLEAHQSLH
Alligator_sinensis_CCG003778.1
C2H2 ZF
1422
1445
IACGSCSQTFGTNSKLRLHRLRVH
Alligator_sinensis_CCG003778.1
C2H2 ZF
1480
1503
YPCARCDARFSSPTALKQHALRRH
Alligator_sinensis_CCG003778.1
C2H2 ZF
1509
1532
CRCPHCGLQCRSRATLRGHARRQH
Alligator_sinensis_CCG003778.1
C2H2 ZF
1536
1559
LECGACHEAFATRRDLETHRQQQH
Alligator_sinensis_CCG003778.1
C2H2 ZF
1626
1648
YKCSDCAYTTKNKQKITWHIRIH
Alligator_sinensis_CCG003778.1
C2H2 ZF
1654
1676
YKCHLCTYTCADPSRLKYHMRIH
Alligator_sinensis_CCG003778.1
C2H2 ZF
1682
1704
YLCPECGYKCKWVNQLKYHMTKH
Alligator_sinensis_CCG003778.1
C2H2 ZF
1710
1733
YGCEECEYRTNRADALRVHRDTRH
Alligator_sinensis_CCG003778.1
C2H2 ZF
1739
1761
HMCEQCGKAFKTRFLLRTHLRAH
Alligator_sinensis_CCG003778.1
C2H2 ZF
1767
1789
YVCGVCRRAFRWAAGLRHHFLTH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found