CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG003810.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG003810.1
T133043_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG003810.1
C2H2 ZF
54
76
YRCVTCGKTFTHFFSLVQHRRMH
Alligator_sinensis_CCG003810.1
C2H2 ZF
82
103
HRCTECRENFISWQGLSQHRCV
Alligator_sinensis_CCG003810.1
C2H2 ZF
110
132
HCCTKCGKSFRQPSSLARHRCMH
Alligator_sinensis_CCG003810.1
C2H2 ZF
138
160
HHCSACGKSFISSSKLPQHQVIH
Alligator_sinensis_CCG003810.1
C2H2 ZF
166
188
HQCSACGESFTHSSTLARHKCIH
Alligator_sinensis_CCG003810.1
C2H2 ZF
194
216
YHCSECAKNFTRSFSLAYHQHSH
Alligator_sinensis_CCG003810.1
C2H2 ZF
222
244
HQCSECGKRFSYSSHLAKHQRIH
Alligator_sinensis_CCG003810.1
C2H2 ZF
250
272
YQCSECGKSFIQSSHLAQHKRIH
Alligator_sinensis_CCG003810.1
C2H2 ZF
278
300
HQCSECGKSFTRSFGLAYHQHVH
Alligator_sinensis_CCG003810.1
C2H2 ZF
306
328
HRCSECGKSFSYSSELARHQRIH
Alligator_sinensis_CCG003810.1
C2H2 ZF
334
356
YQCSECGKSFSYSSELARHQRVH
Alligator_sinensis_CCG003810.1
C2H2 ZF
362
384
YQCSECGKSFRYSCHLAVHQRVH
Alligator_sinensis_CCG003810.1
C2H2 ZF
390
412
YLCSVCGKSFSCSSSLTKHKHIH
Alligator_sinensis_CCG003810.1
C2H2 ZF
418
440
YHCSECGKSFSCSSELARHQRIH
Alligator_sinensis_CCG003810.1
C2H2 ZF
465
487
YLCSVCGKSFSYSSSLTKHKHIH
Alligator_sinensis_CCG003810.1
C2H2 ZF
493
515
YHCSECGKSFNYSSELARHQRIH
Alligator_sinensis_CCG003810.1
C2H2 ZF
521
543
YQCSVCGKSFTQSSHLAKHQHVH
Alligator_sinensis_CCG003810.1
C2H2 ZF
549
571
HQYSDCGKSFSIPFNLARHRRMH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found