CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG003830.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG003830.1
T133044_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG003830.1
C2H2 ZF
162
183
YSCPECRKNFISWQDLSQHQCA
Alligator_sinensis_CCG003830.1
C2H2 ZF
196
212
GKSFRHPSNLARHWCMH
Alligator_sinensis_CCG003830.1
C2H2 ZF
218
240
YQCLECGKSFTRSSNLAQHQRIH
Alligator_sinensis_CCG003830.1
C2H2 ZF
246
268
HHCSECGKTFNHSRNLRRHWLIH
Alligator_sinensis_CCG003830.1
C2H2 ZF
274
296
HQCSECGKSFTLSSDLARHQRIH
Alligator_sinensis_CCG003830.1
C2H2 ZF
302
324
HQCLECGKSFTRSSHLNQHQLIH
Alligator_sinensis_CCG003830.1
C2H2 ZF
330
352
HQCPECGKSFTHSFSLVQHQHIH
Alligator_sinensis_CCG003830.1
C2H2 ZF
358
380
HQCLECGKSFTRSSSLAQHQHIH
Alligator_sinensis_CCG003830.1
C2H2 ZF
386
408
HRCSECGRSYTCSSHLVRHQLTH
Alligator_sinensis_CCG003830.1
C2H2 ZF
414
436
HQCSECGKSFTRSSYLVQHQLIH
Alligator_sinensis_CCG003830.1
C2H2 ZF
442
464
HQCPECGKSFTHSSNLAKHQHIH
Alligator_sinensis_CCG003830.1
C2H2 ZF
470
492
HRCSECGRSYTCSSHLVRHQLTH
Alligator_sinensis_CCG003830.1
C2H2 ZF
498
520
HQCSECGKSFTLSSDLIRHQRIH
Alligator_sinensis_CCG003830.1
C2H2 ZF
526
548
HQCLECGKSFTRSSHLVQHQLIH
Alligator_sinensis_CCG003830.1
C2H2 ZF
554
576
HQCPECGKSFTHSFSLAQHQHFH
Alligator_sinensis_CCG003830.1
C2H2 ZF
582
604
HQCPECGKSFARSSSLVQHQHIH
Alligator_sinensis_CCG003830.1
C2H2 ZF
610
632
HQCSVCGKSYTCCSNLVRHQLIH
Alligator_sinensis_CCG003830.1
C2H2 ZF
638
660
HQCSECGKSFTHSFHLAQHQRIH
Alligator_sinensis_CCG003830.1
C2H2 ZF
666
688
YQCSECGKSFTRSSHLARHQLIH
Alligator_sinensis_CCG003830.1
C2H2 ZF
927
948
QCSECGKSFTRSSTMAQHQRLH
Alligator_sinensis_CCG003830.1
C2H2 ZF
954
976
HQCLECGKSFTQSSSLAQHQLLH
Alligator_sinensis_CCG003830.1
C2H2 ZF
982
1004
HQCSECGKSFAQSSNLTEHQRIH
Alligator_sinensis_CCG003830.1
C2H2 ZF
1010
1032
YQCSECGKSFTHSSSLTQHQRIH
Alligator_sinensis_CCG003830.1
C2H2 ZF
1038
1060
YQCSECGKSFTPSSSLAQHQRIH
Alligator_sinensis_CCG003830.1
C2H2 ZF
1066
1088
HHCSECGKSFTCSSSLARHQHLH
Alligator_sinensis_CCG003830.1
C2H2 ZF
1094
1116
HQCLECGKNFTHSSSLAQHQRLH
Alligator_sinensis_CCG003830.1
C2H2 ZF
1122
1144
HQCSECGKSFTRSSSLAEHQHLH
Alligator_sinensis_CCG003830.1
C2H2 ZF
1150
1172
HQCLECGKSFTHSSGLAHHQRLH
Alligator_sinensis_CCG003830.1
C2H2 ZF
1178
1200
HQCLECGKSFTHSSSLTRHQHIH
Alligator_sinensis_CCG003830.1
C2H2 ZF
1206
1228
CECSECGKSFTCSSSLTRHQCIH
Alligator_sinensis_CCG003830.1
C2H2 ZF
1234
1256
YQCSECGKSFTRSCSLARHQHIH
Alligator_sinensis_CCG003830.1
C2H2 ZF
1262
1283
HQCSECGKSFTCSSLAQHQLIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found