CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG003831.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG003831.1
T133045_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG003831.1
C2H2 ZF
206
227
HCCTECRKNFITWQDLSQHQCV
Alligator_sinensis_CCG003831.1
C2H2 ZF
235
256
HGTKCAKSFRQLSNLARHWCMH
Alligator_sinensis_CCG003831.1
C2H2 ZF
262
284
HQCSECGKSFTHSFSLTQHQRVH
Alligator_sinensis_CCG003831.1
C2H2 ZF
290
312
YRCLECGKSFTHFFSLAQHQHIH
Alligator_sinensis_CCG003831.1
C2H2 ZF
318
340
YQCPECGKSFTHSFSLAEHQRIH
Alligator_sinensis_CCG003831.1
C2H2 ZF
346
368
HQCSECGKSFTRSFSLAQHQRIH
Alligator_sinensis_CCG003831.1
C2H2 ZF
374
396
HQCSECGKTFNHSRNLRRHRLIH
Alligator_sinensis_CCG003831.1
C2H2 ZF
402
424
HQCSECGKSFTRSFSLAQHQRIH
Alligator_sinensis_CCG003831.1
C2H2 ZF
430
452
HQCSECGKSFTRSSHLIQHQLIH
Alligator_sinensis_CCG003831.1
C2H2 ZF
458
480
HQCLECGKSFTHSFSLVEHQRIH
Alligator_sinensis_CCG003831.1
C2H2 ZF
486
508
HQCLQCGKSFTHSSNLAQHQRIH
Alligator_sinensis_CCG003831.1
C2H2 ZF
514
536
YQCLECGKNFARSTSLAQHQRIH
Alligator_sinensis_CCG003831.1
C2H2 ZF
542
564
HQCLECGKSYTYSSNLLRHQLIH
Alligator_sinensis_CCG003831.1
C2H2 ZF
570
592
HQCSECGKSFTQSFLLAQHQRIH
Alligator_sinensis_CCG003831.1
C2H2 ZF
598
620
YQCSACGKSFTRSSHLARHQLIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found