CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG004341.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG004341.1
T133056_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG004341.1
C2H2 ZF
115
136
ICAECGKHFSRRSHLVIHQRIH
Alligator_sinensis_CCG004341.1
C2H2 ZF
142
164
YQCPECGRRFSQSSTLISHQRTH
Alligator_sinensis_CCG004341.1
C2H2 ZF
170
192
YTCPDCGRSFSQSSTLLTHHRLH
Alligator_sinensis_CCG004341.1
C2H2 ZF
198
220
YKCLDCGRSFSQNSTFVIHQRTH
Alligator_sinensis_CCG004341.1
C2H2 ZF
226
248
YTCLDCGKSFSVSSYLITHNRIH
Alligator_sinensis_CCG004341.1
C2H2 ZF
254
276
YKCPACGKGFIDSSTFVRHQRTH
Alligator_sinensis_CCG004341.1
C2H2 ZF
282
304
YRCSDCGKSFSLSSYLVKHRTLH
Alligator_sinensis_CCG004341.1
C2H2 ZF
310
332
YRCTECGKHFGESSDLLRHHRTH
Alligator_sinensis_CCG004341.1
C2H2 ZF
477
499
KTCTECEKTFTRRSELLIHQRLH
Alligator_sinensis_CCG004341.1
C2H2 ZF
505
527
YKCLDCGKSFTRSSNRNAHQRIH
Alligator_sinensis_CCG004341.1
C2H2 ZF
533
555
YKCTDCGKSFSQSSDLVKHQRLH
Alligator_sinensis_CCG004341.1
C2H2 ZF
561
583
YKCTKCGKSFSWSSDLIVHQRIH
Alligator_sinensis_CCG004341.1
C2H2 ZF
589
611
YKCSDCGKSFNRSSNLNTHQRTH
Alligator_sinensis_CCG004341.1
C2H2 ZF
617
639
YKCADCGKSFSYSSAFIKHQRTH
Alligator_sinensis_CCG004341.1
C2H2 ZF
645
667
YKCTDCGKSFFESSALIRHQRIH
Alligator_sinensis_CCG004341.1
C2H2 ZF
673
695
YKCPDCGKNFKQSSSLITHLRIH
Alligator_sinensis_CCG004341.1
C2H2 ZF
701
723
YRCTDCGKSFIVSSALIRHQRVH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found