CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG004485.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG004485.1
T133077_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG004485.1
C2H2 ZF
67
89
YACPECNKAFFQSSTLSRHQRTH
Alligator_sinensis_CCG004485.1
C2H2 ZF
95
117
YACSLCGKQFSQRANHTQHQHTH
Alligator_sinensis_CCG004485.1
C2H2 ZF
123
145
YRCGDCGKTFAFSSRLLQHQLVH
Alligator_sinensis_CCG004485.1
C2H2 ZF
151
173
YRCPDCHKAFNQKSNLKQHQRLH
Alligator_sinensis_CCG004485.1
C2H2 ZF
191
213
YGCHQCGKAFRVSSHLLRHQVTH
Alligator_sinensis_CCG004485.1
C2H2 ZF
219
241
YTCPDCGRGFALSAHLQRHRAVH
Alligator_sinensis_CCG004485.1
C2H2 ZF
247
269
YPCPQCGKRFGLGARLDRHLRTH
Alligator_sinensis_CCG004485.1
C2H2 ZF
275
297
YKCGDCGAGFVDSSALIKHRHIH
Alligator_sinensis_CCG004485.1
C2H2 ZF
303
325
YACPECGKSFGRSSYLATHRRVH
Alligator_sinensis_CCG004485.1
C2H2 ZF
331
353
YPCPDCGKGFASSSDLSKHRRVH
Alligator_sinensis_CCG004485.1
C2H2 ZF
359
381
YSCGLCGRAFSRSSNLLAHQKVH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found