CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG004510.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG004510.1
T133078_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG004510.1
C2H2 ZF
300
323
YTCEKCNQSFHFIKQYQSHMELKH
Alligator_sinensis_CCG004510.1
C2H2 ZF
331
354
YSCNLCDQLFSNRQNLKQHKLTVH
Alligator_sinensis_CCG004510.1
C2H2 ZF
360
383
FPCMSCDKRFKRQKDINDHVRRVH
Alligator_sinensis_CCG004510.1
C2H2 ZF
391
412
ACPYCDKVISSKCGLTVHMRTH
Alligator_sinensis_CCG004510.1
C2H2 ZF
418
441
YKCERCLASFAQRSAYNTHVRKIH
Alligator_sinensis_CCG004510.1
C2H2 ZF
603
623
YQCDICSKSFASYNSWKEHRA
Alligator_sinensis_CCG004510.1
C2H2 ZF
632
655
FACTLCDATFKRKRDVRTHYMRKH
Alligator_sinensis_CCG004510.1
C2H2 ZF
663
684
LCSVCGKILSSRTALMFHMRTH
Alligator_sinensis_CCG004510.1
C2H2 ZF
690
712
YECSVCHNKFAQPSQLKIHTRSH
Alligator_sinensis_CCG004510.1
C2H2 ZF
718
740
YVCEDCGACFVDKGKLNSHKRTH
Alligator_sinensis_CCG004510.1
C2H2 ZF
774
796
YKCNVCGKTFGLRASLAQHVNVH
Alligator_sinensis_CCG004510.1
C2H2 ZF
802
824
YFCEQCGKTFTQQGALRRHQRIH
Alligator_sinensis_CCG004510.1
C2H2 ZF
830
852
YKCRACERTFTDMSTLRRHVSVH
Alligator_sinensis_CCG004510.1
C2H2 ZF
1058
1081
YRCETCNQTFANRCNLKSHQRHVH
Alligator_sinensis_CCG004510.1
C2H2 ZF
1087
1110
FPCEFCGKKFKRKKDVKRHILQVH
Alligator_sinensis_CCG004510.1
C2H2 ZF
1117
1139
HQCQQCGKGLSSKTALRLHERTH
Alligator_sinensis_CCG004510.1
C2H2 ZF
1145
1167
YGCTECEAKFSQPSALKTHMRIH
Alligator_sinensis_CCG004510.1
C2H2 ZF
1173
1195
FVCDECGARFTQNHMLIYHKRCH
Alligator_sinensis_CCG004510.1
C2H2 ZF
1201
1223
FMCETCGKSFASKEYLKHHNRIH
Alligator_sinensis_CCG004510.1
C2H2 ZF
1229
1251
FKCEVCFRTFAQRNSLYQHIKVH
Alligator_sinensis_CCG004510.1
C2H2 ZF
1257
1279
YCCDQCGKQFTQLNALQRHHRIH
Alligator_sinensis_CCG004510.1
C2H2 ZF
1285
1307
FMCNACGRTFTDKSTLRRHTSIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found