CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG004543.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG004543.1
T133080_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG004543.1
C2H2 ZF
349
370
LCPECGKSFVSLSDLRGHQGMH
Alligator_sinensis_CCG004543.1
C2H2 ZF
376
398
YHCAECKKGFSRWDHLQNHTCIH
Alligator_sinensis_CCG004543.1
C2H2 ZF
404
426
FSCPQCGKRFTWSSKLIRHLRVH
Alligator_sinensis_CCG004543.1
C2H2 ZF
432
454
FSCIECGKSFTQMEKLTNHRRVH
Alligator_sinensis_CCG004543.1
C2H2 ZF
460
482
FSCSQCRKSFTQSSHLTKHLRIH
Alligator_sinensis_CCG004543.1
C2H2 ZF
488
510
FSCSQCGKSFTQSDKLANHLRVH
Alligator_sinensis_CCG004543.1
C2H2 ZF
516
538
FSCIQCRKSFTQSFTLTQHLRMH
Alligator_sinensis_CCG004543.1
C2H2 ZF
544
566
FSCPQCMKSFTDHSKLMWHQRAH
Alligator_sinensis_CCG004543.1
C2H2 ZF
572
594
FACSQCGKSFIQSSKLIRHLRVH
Alligator_sinensis_CCG004543.1
C2H2 ZF
600
622
FSCSQCGKCFTQSSTLAKHLLVH
Alligator_sinensis_CCG004543.1
C2H2 ZF
628
650
FSCSQCGKSFTQSATLTQHLRIH
Alligator_sinensis_CCG004543.1
C2H2 ZF
656
678
FSCLQCGKSFTDHSMLTQHRRRH
Alligator_sinensis_CCG004543.1
C2H2 ZF
684
706
FSCTQCGKSFMQSSNLTVHLRMH
Alligator_sinensis_CCG004543.1
C2H2 ZF
712
734
FSCSQCGKSFTQSSTLTTHLRVH
Alligator_sinensis_CCG004543.1
C2H2 ZF
740
762
FSCRQCGKSFTQSSQLTRHLRTH
Alligator_sinensis_CCG004543.1
C2H2 ZF
768
790
FSCPQCGKSFTDHSMLTQHQRRH
Alligator_sinensis_CCG004543.1
C2H2 ZF
796
818
FSCGQCGKSFMQSSHLTVHLRMH
Alligator_sinensis_CCG004543.1
C2H2 ZF
824
846
FSCPQCGKNFTRSSTLTSHLRLH
Alligator_sinensis_CCG004543.1
C2H2 ZF
852
874
FSCGQCGKSFTQNSHLTRHLRVH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found