CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG004546.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG004546.1
T133082_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG004546.1
C2H2 ZF
325
347
YCCVKCGKTYTRFSSLAWHRSMH
Alligator_sinensis_CCG004546.1
C2H2 ZF
381
402
HCTKCGKNFRQPSSLARHMQMH
Alligator_sinensis_CCG004546.1
C2H2 ZF
433
455
HQCFECGKSFTCASYLAQHQLIH
Alligator_sinensis_CCG004546.1
C2H2 ZF
461
483
HQCSVCGKSFTQSPNLVRHQCIH
Alligator_sinensis_CCG004546.1
C2H2 ZF
489
511
HQCPDCGKRFTRPSNLAQHKRIH
Alligator_sinensis_CCG004546.1
C2H2 ZF
517
539
YQCSQCGKSFIRSSSLAQHQRIH
Alligator_sinensis_CCG004546.1
C2H2 ZF
545
567
HQCSVCGKSFTQSPNLVRHQRIH
Alligator_sinensis_CCG004546.1
C2H2 ZF
573
595
HQCPECGKSFTRSCYLAQHQLIH
Alligator_sinensis_CCG004546.1
C2H2 ZF
601
623
HQCTVCGKSFTKSCHLARHQRIH
Alligator_sinensis_CCG004546.1
C2H2 ZF
629
651
HQCSECGKSFTCSSQLAQHQVVH
Alligator_sinensis_CCG004546.1
C2H2 ZF
657
679
HQCSECGKSFTQSSSLARHQHIH
Alligator_sinensis_CCG004546.1
C2H2 ZF
685
707
HQCSECGKSFTNPYNLAQHQRIH
Alligator_sinensis_CCG004546.1
C2H2 ZF
713
735
HHCSVCGKSFTQSSHLARHQRIH
Alligator_sinensis_CCG004546.1
C2H2 ZF
741
763
HQCFVCGKSFTCSSQLTQHQVVH
Alligator_sinensis_CCG004546.1
C2H2 ZF
769
791
HQCSECGKSFTQSSSLSQHQRIH
Alligator_sinensis_CCG004546.1
C2H2 ZF
797
819
HHCYECGKSFTNSSSLSQHQRIH
Alligator_sinensis_CCG004546.1
C2H2 ZF
825
847
HHCSECGKSFTQSSHLAQHQRMH
Alligator_sinensis_CCG004546.1
C2H2 ZF
853
875
HQCLECGKSFTNSSNLAQHQRIH
Alligator_sinensis_CCG004546.1
C2H2 ZF
881
903
YECSVCGKSFTQFFSLAQHQRIH
Alligator_sinensis_CCG004546.1
C2H2 ZF
909
931
YQCSVCGKSFTQSSHLAQHQRTH
Alligator_sinensis_CCG004546.1
C2H2 ZF
937
959
HQCFECGKSFTRSCYLVQHQRIH
Alligator_sinensis_CCG004546.1
C2H2 ZF
965
987
HQCSECGKSFSHSSSLAWHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found