CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG004556.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG004556.1
T133089_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG004556.1
C2H2 ZF
397
419
HHCTKCGKSFRYPSSLARHRCMH
Alligator_sinensis_CCG004556.1
C2H2 ZF
425
447
HQCSECGKSFTHPSLLAQHQRTH
Alligator_sinensis_CCG004556.1
C2H2 ZF
453
475
HQCSVCGKRFTQSSHLVTHQRIH
Alligator_sinensis_CCG004556.1
C2H2 ZF
481
503
HQCSECGKTFTQSSSLAKHQRIH
Alligator_sinensis_CCG004556.1
C2H2 ZF
509
531
HQCSECGKSFTHPSLLARHQRIH
Alligator_sinensis_CCG004556.1
C2H2 ZF
537
559
HQCSVCGRRFTQSSHLVTHQRIH
Alligator_sinensis_CCG004556.1
C2H2 ZF
565
587
HQCSVCGKMFTQSSSLAQHQCIH
Alligator_sinensis_CCG004556.1
C2H2 ZF
593
615
HQCSECGKSFTHPSLLARHRRIH
Alligator_sinensis_CCG004556.1
C2H2 ZF
621
643
HQCSVCGKRFTQYCNLAQHWRIH
Alligator_sinensis_CCG004556.1
C2H2 ZF
649
671
HQCSECGKRFTQSSHLVTHQRIH
Alligator_sinensis_CCG004556.1
C2H2 ZF
677
699
HSCLECGKRFADFSSLAKHQRIH
Alligator_sinensis_CCG004556.1
C2H2 ZF
705
727
YQCSECGKSFTQSSHLVKHQHSH
Alligator_sinensis_CCG004556.1
C2H2 ZF
733
754
HQCFESAKIFTRCSSLAKHQRH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found