CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG004644.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG004644.1
T133098_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG004644.1
C2H2 ZF
438
459
HCCTKCGKRFRQLSSLARHWCM
Alligator_sinensis_CCG004644.1
C2H2 ZF
466
488
HQCLECGKSFTLSSSLAQHQRIH
Alligator_sinensis_CCG004644.1
C2H2 ZF
513
535
HQCSECGKRFTQFSNLTKHQLIH
Alligator_sinensis_CCG004644.1
C2H2 ZF
541
563
HQCSECGKSFNRSSNLALHQLIH
Alligator_sinensis_CCG004644.1
C2H2 ZF
569
591
HQCSECGKTFIHFSYLTKHRLIH
Alligator_sinensis_CCG004644.1
C2H2 ZF
599
619
CLECGKSFTRSTYLAQHQLIH
Alligator_sinensis_CCG004644.1
C2H2 ZF
625
647
HQCSECGKSFTHSSSLAQHQRIH
Alligator_sinensis_CCG004644.1
C2H2 ZF
653
675
HQCSECGKSFTHSSSLAQHQLIH
Alligator_sinensis_CCG004644.1
C2H2 ZF
681
703
YQCSECGKSFTHSSGLAWHQRTH
Alligator_sinensis_CCG004644.1
C2H2 ZF
709
731
YQCLECGKSFTHSSGLARHQRIH
Alligator_sinensis_CCG004644.1
C2H2 ZF
737
759
HQCLECGKSFTQSSSLAQHRRIH
Alligator_sinensis_CCG004644.1
C2H2 ZF
765
787
YQCSECGKSFTQSSSLAHHQRIH
Alligator_sinensis_CCG004644.1
C2H2 ZF
793
815
HHCSECGKSFTQFSNLAQHQLIH
Alligator_sinensis_CCG004644.1
C2H2 ZF
821
843
HQCSDCGKCFTQFSKLAQHHLIH
Alligator_sinensis_CCG004644.1
C2H2 ZF
849
871
YQCSECGKSFTHSSNLTQHQRIH
Alligator_sinensis_CCG004644.1
C2H2 ZF
877
899
HHCSECGKSFTLSSDLTKHRLIH
Alligator_sinensis_CCG004644.1
C2H2 ZF
907
927
CSECGKSFTLSSNRAQHQLIH
Alligator_sinensis_CCG004644.1
C2H2 ZF
933
955
HQCSECGKSFTHSSNLTQHQRIH
Alligator_sinensis_CCG004644.1
C2H2 ZF
961
983
YHCSECGKSFTYSSSLARHQLIH
Alligator_sinensis_CCG004644.1
C2H2 ZF
989
1010
YQCLGCGKCFLHSSKLAQHQCI
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found