CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG004699.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG004699.1
T133100_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG004699.1
C2H2 ZF
223
250
HQCGQHCCTKCGKRFKQLSSLARHWCMH
Alligator_sinensis_CCG004699.1
C2H2 ZF
256
278
HQCSECEKSFTRSSNLARHHRIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
285
306
QCSVCGKNFTLSSRLAQHQLIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
312
334
HQCSECGKSFSQSSSLAEHQRIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
340
362
HQCLGCGKRFTRSFTLVQHQRIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
368
390
HQCLECGKSFAYSSNLAQHQLIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
396
418
HQCSECGKSFTLSSRLAQHQLSH
Alligator_sinensis_CCG004699.1
C2H2 ZF
423
445
HQCSECGKSFTYSSRLAQHQLIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
451
473
HQCSECEKSFTYSSRLAQHQLIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
479
501
HQCSECGKSFTLSSRLAQHQLIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
507
529
HQCSECGKSFAVSSSLAKHQLIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
535
557
HQCSECGKSFTQSSHLARHQLIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
563
585
YQCSECWKTFTDPSRLAQHQLIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
591
613
HQCSECGKSFTQSSSMARHQLIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
619
641
HQSLECRKNFSVSSSLAKHQVIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
647
669
HKCSECGKSFAHSSRLAQHQLIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
675
697
HQCSECGKSFTQSSSMARHQLIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
703
725
HQCLECGKSFTASSSLAKHQLIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
731
753
HKCSECGKSFAHSSRLAQHQLIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
759
781
HQCSKCGKRFTQSSNMARHQLIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
787
809
HQCLECGKSFTLSSSLAKHQRIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
815
837
HQCSECGKSFTVSSSLAKHQLIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
843
865
HQCSECGKSFTLSSSLAKHQRIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
871
893
HQCSECGKSFTQSSSLVEHLRIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
899
921
HQCSECGKSFAFFSSLGKHQRIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
927
949
YQCLECGKRFTQSSTLSQHHHIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
955
976
HQCLECGKSFARSSRLAQHQLI
Alligator_sinensis_CCG004699.1
C2H2 ZF
983
1005
YQCLECGKSFARSSRLAQHQLIH
Alligator_sinensis_CCG004699.1
C2H2 ZF
1011
1033
HQCSECGKSFTPSSSLAKHQLIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found