CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG004810.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG004810.1
T133106_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG004810.1
C2H2 ZF
255
276
SHCTKCEKSFSQMSKLALHQLI
Alligator_sinensis_CCG004810.1
C2H2 ZF
283
305
YQCSVCGKSFTRSASLAGHQRIH
Alligator_sinensis_CCG004810.1
C2H2 ZF
311
333
HECSACGKRFTHSSSLFYHQRIH
Alligator_sinensis_CCG004810.1
C2H2 ZF
339
361
HQCPECGKSFTQVSHLSRHQEIH
Alligator_sinensis_CCG004810.1
C2H2 ZF
367
385
HQCPECGKSFTEASQLAQH
Alligator_sinensis_CCG004810.1
C2H2 ZF
395
417
HQCPECGKGFTQSSHLARHRRSH
Alligator_sinensis_CCG004810.1
C2H2 ZF
423
445
HQCPECGKGFTQASHLARHQLIH
Alligator_sinensis_CCG004810.1
C2H2 ZF
451
473
YQCPDCGKSFIRSCHLAQHRHVH
Alligator_sinensis_CCG004810.1
C2H2 ZF
479
501
HRCSECGKSFIWSSQLAQHQHIH
Alligator_sinensis_CCG004810.1
C2H2 ZF
507
529
YQCKECGKSFAFSSHLAQHRHIH
Alligator_sinensis_CCG004810.1
C2H2 ZF
535
557
HQCSECGKSFIWNFQLVQHQRIH
Alligator_sinensis_CCG004810.1
C2H2 ZF
563
585
YQCKECGKSYTLSSHLTRHQRTH
Alligator_sinensis_CCG004810.1
C2H2 ZF
591
613
FQCPKCTKSFTEASSLAQHQRRH
Alligator_sinensis_CCG004810.1
C2H2 ZF
1001
1022
SHCTKCGKSFSQMSKLALHQLI
Alligator_sinensis_CCG004810.1
C2H2 ZF
1029
1051
YQCSVCGKSFTLSSSLAEHQRIH
Alligator_sinensis_CCG004810.1
C2H2 ZF
1059
1079
CSTCGKHFTHSSSLNHHQRIH
Alligator_sinensis_CCG004810.1
C2H2 ZF
1085
1107
HQCPECGKSFTQVSHMTRHQQIH
Alligator_sinensis_CCG004810.1
C2H2 ZF
1113
1135
HQCPDCGKSFTQVSHLARHQQIH
Alligator_sinensis_CCG004810.1
C2H2 ZF
1141
1163
HQCHECGKSFTLSSHLARHQRIH
Alligator_sinensis_CCG004810.1
C2H2 ZF
1169
1191
HQCHECGKNFTLSSHLARHQRMH
Alligator_sinensis_CCG004810.1
C2H2 ZF
1197
1218
YQCPECGKSFTEACHLAQHQRI
Alligator_sinensis_CCG004810.1
C2H2 ZF
1225
1247
HHCLECGKSFIWSSHLTRHRRIH
Alligator_sinensis_CCG004810.1
C2H2 ZF
1253
1275
YQCPECGKSFTLSFHLIRHQRIH
Alligator_sinensis_CCG004810.1
C2H2 ZF
1281
1303
YQCSECGKSFSETSRLAQHQRMH
Alligator_sinensis_CCG004810.1
C2H2 ZF
1309
1331
HRCPKCGKSFTLSSHLTRHQRIH
Alligator_sinensis_CCG004810.1
C2H2 ZF
1337
1359
YQCPECGKTFTETSHLAQHQRIH
Alligator_sinensis_CCG004810.1
C2H2 ZF
1365
1387
HQCLECGKSFLWASQLARHQHIH
Alligator_sinensis_CCG004810.1
C2H2 ZF
1393
1415
YQCPECGKSFTLSSHLVRHQHIH
Alligator_sinensis_CCG004810.1
C2H2 ZF
1424
1443
SECGKSFSETSHLAQHQRMH
Alligator_sinensis_CCG004810.1
C2H2 ZF
1449
1471
HQCLKCGKSFLWASQLARHQHVH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found