CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG004985.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG004985.1
T133111_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG004985.1
C2H2 ZF
106
128
YKCNECGKCFRLSSTLITHQRRH
Alligator_sinensis_CCG004985.1
C2H2 ZF
134
156
YKCADCGKSFSVGSAFIQHQRVH
Alligator_sinensis_CCG004985.1
C2H2 ZF
163
185
CQCNICGKSFSTSTSLVKHQKLH
Alligator_sinensis_CCG004985.1
C2H2 ZF
191
213
YKCDECGKGFNWNSHLERHRRIH
Alligator_sinensis_CCG004985.1
C2H2 ZF
219
241
YTCPECGKSFSWSSHLDRHRRTH
Alligator_sinensis_CCG004985.1
C2H2 ZF
279
301
YQCSECGRGFNKSATLAKHQRVH
Alligator_sinensis_CCG004985.1
C2H2 ZF
307
329
YKCDQCGKSFGLSASLLQHQRSH
Alligator_sinensis_CCG004985.1
C2H2 ZF
335
357
YQCSDCGKSFAWSSHLDRHRRIH
Alligator_sinensis_CCG004985.1
C2H2 ZF
363
385
FRCEDCGKSFSQSSHLERHQRVH
Alligator_sinensis_CCG004985.1
C2H2 ZF
417
430
CKCTDCGKSFLWSS
Alligator_sinensis_CCG004985.1
C2H2 ZF
442
463
HKCTECGKSFTYRAENVKHQGT
Alligator_sinensis_CCG004985.1
C2H2 ZF
470
492
YTCPECGKSFGQNSALVKHRRMH
Alligator_sinensis_CCG004985.1
C2H2 ZF
498
520
YKCGDCGKSFSVRSNLIKHQRTH
Alligator_sinensis_CCG004985.1
C2H2 ZF
526
548
YKCPDCGKGFIQKSDLTKHRRMH
Alligator_sinensis_CCG004985.1
C2H2 ZF
554
576
YKCNVCGKCFSVSSNLIKHQRIH
Alligator_sinensis_CCG004985.1
C2H2 ZF
582
604
YQCTDCGKSFIQRSELTIHQRVH
Alligator_sinensis_CCG004985.1
C2H2 ZF
610
632
YKCPECGKCFSRSSHLNRHQRTH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found