CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG005333.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG005333.1
T133129_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG005333.1
C2H2 ZF
763
785
YCCVTCGKTFARFSFLAQHRSSH
Alligator_sinensis_CCG005333.1
C2H2 ZF
819
841
HHCTVCGKSFRQPSSLARHMLVH
Alligator_sinensis_CCG005333.1
C2H2 ZF
872
894
HQCSECGESFTCASRLAQHQLVH
Alligator_sinensis_CCG005333.1
C2H2 ZF
900
922
HQCSVCGKSFSQSYYLAQHRHIH
Alligator_sinensis_CCG005333.1
C2H2 ZF
928
950
YQCPDCGKRFTRSSHLTEHKRIH
Alligator_sinensis_CCG005333.1
C2H2 ZF
956
978
YQCAQCGKSFMWSTSLAQHQRIH
Alligator_sinensis_CCG005333.1
C2H2 ZF
984
1006
HQCSECGKSFTQSSNLAQHQRIH
Alligator_sinensis_CCG005333.1
C2H2 ZF
1012
1034
YQCTRCGKSFARSSYLAQHQLIH
Alligator_sinensis_CCG005333.1
C2H2 ZF
1040
1062
HPCSVCGKSFTKSSHLARHQHIH
Alligator_sinensis_CCG005333.1
C2H2 ZF
1068
1090
HQCSECGKSFSRPSHLAKHQLIH
Alligator_sinensis_CCG005333.1
C2H2 ZF
1096
1118
HHCSECGKSFTQSSTLGRHQLIH
Alligator_sinensis_CCG005333.1
C2H2 ZF
1124
1146
HQCPECGKSFTNSFNLVQHQRIH
Alligator_sinensis_CCG005333.1
C2H2 ZF
1152
1174
HQCLVCGKSFTQSSTLVRHQRIH
Alligator_sinensis_CCG005333.1
C2H2 ZF
1180
1202
YQCSVCGKGFTCSSQLAQHQVIH
Alligator_sinensis_CCG005333.1
C2H2 ZF
1208
1230
HQCSVCGKSFTQSSSLAQHQRIH
Alligator_sinensis_CCG005333.1
C2H2 ZF
1236
1258
HQCSECGKSFTCSSSLVQHQRVH
Alligator_sinensis_CCG005333.1
C2H2 ZF
1264
1286
YHCSECGKSFTNSSNLAEHQRIH
Alligator_sinensis_CCG005333.1
C2H2 ZF
1292
1314
HRCSECGKSFAYSSNLTQHQRIH
Alligator_sinensis_CCG005333.1
C2H2 ZF
1320
1342
HQCPECGKSFAQSSSLAQHQRIH
Alligator_sinensis_CCG005333.1
C2H2 ZF
1348
1370
YQCSVCGKSFTRSSHLAQHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found