CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG005633.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG005633.1
T133141_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG005633.1
C2H2 ZF
15
37
YMCSECGLLYNTLEEVVLHQQSH
Alligator_sinensis_CCG005633.1
C2H2 ZF
49
71
YQCLDCGRVLLSPDELLAHQSQH
Alligator_sinensis_CCG005633.1
C2H2 ZF
91
113
YQCGECQELFPSPELWLAHRQSH
Alligator_sinensis_CCG005633.1
C2H2 ZF
188
210
FTCTECPRVFSTANRLVAHQRAH
Alligator_sinensis_CCG005633.1
C2H2 ZF
215
237
HECPRCSKVFKKAASLEQHLRLH
Alligator_sinensis_CCG005633.1
C2H2 ZF
243
265
YLCVDCGLGFGTEMTLVGHRRSH
Alligator_sinensis_CCG005633.1
C2H2 ZF
273
292
CACGKAFSNMTKFLYHRRTH
Alligator_sinensis_CCG005633.1
C2H2 ZF
321
344
FPCPQCGKAFSSHPRLVRHRRLVH
Alligator_sinensis_CCG005633.1
C2H2 ZF
350
372
HPCPTCGKPFKKLVHVRNHLRTH
Alligator_sinensis_CCG005633.1
C2H2 ZF
378
400
FQCCECGKTFASQANLARHHLTH
Alligator_sinensis_CCG005633.1
C2H2 ZF
406
428
YQCDVCHKRFTQSSNLQQHRRLH
Alligator_sinensis_CCG005633.1
C2H2 ZF
453
475
LACVLCGKAFANWSGLSRHQRCH
Alligator_sinensis_CCG005633.1
C2H2 ZF
481
503
HQCPLCTKSFGAASGLRLHQRTH
Alligator_sinensis_CCG005633.1
C2H2 ZF
509
531
FPCPDCPKAFRQATHLQEHRRLH
Alligator_sinensis_CCG005633.1
C2H2 ZF
537
559
YRCPLCPKAFVQAMHLAEHRRTH
Alligator_sinensis_CCG005633.1
C2H2 ZF
565
587
HRCPLCPKAFKTLSNLRSHRRTH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found