CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG005889.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG005889.1
T133147_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG005889.1
C2H2 ZF
344
365
HGTKCVKKFGHSSNLVKHWCMH
Alligator_sinensis_CCG005889.1
C2H2 ZF
371
393
QQCSECGESFTQSSNLAKHRLIH
Alligator_sinensis_CCG005889.1
C2H2 ZF
399
416
QQCSECGKSFTYSSRLAE
Alligator_sinensis_CCG005889.1
C2H2 ZF
427
449
HQCSQCGKSFTCSSRLAQHKHIH
Alligator_sinensis_CCG005889.1
C2H2 ZF
455
476
HQCECGKRFTYSSRLVQHQLIH
Alligator_sinensis_CCG005889.1
C2H2 ZF
482
504
YQCSECGKSYTCSSTLAQHQRIH
Alligator_sinensis_CCG005889.1
C2H2 ZF
510
532
HQCSECGKSFTSSSRLAQHKHVH
Alligator_sinensis_CCG005889.1
C2H2 ZF
538
560
HQCSECGKSFTYSSRLAEHQRIH
Alligator_sinensis_CCG005889.1
C2H2 ZF
566
588
HLCSECGKSYTCSSTLAQHQLIH
Alligator_sinensis_CCG005889.1
C2H2 ZF
594
616
YQCSECGKSFTWSSSLARHQLVH
Alligator_sinensis_CCG005889.1
C2H2 ZF
621
638
HRCSECGKSFTHSSRLAE
Alligator_sinensis_CCG005889.1
C2H2 ZF
649
671
HQCLQCGKSFNQSSDLAKHRLIH
Alligator_sinensis_CCG005889.1
C2H2 ZF
677
699
HQCLECGKRFTHSYRLAQHQRIH
Alligator_sinensis_CCG005889.1
C2H2 ZF
705
727
HQCSECGKRFTQFSTLAQHQRIH
Alligator_sinensis_CCG005889.1
C2H2 ZF
734
755
RCSECGKSFIHYSSLAQHQRIH
Alligator_sinensis_CCG005889.1
C2H2 ZF
761
783
HRCSVCGKSFTCFSSLAQHQRSH
Alligator_sinensis_CCG005889.1
C2H2 ZF
789
811
HQCSECGKSFTHSSHLTRHQRIH
Alligator_sinensis_CCG005889.1
C2H2 ZF
817
838
HQCLECGKSFARSSSLAHHQRL
Alligator_sinensis_CCG005889.1
C2H2 ZF
845
867
LQCLECGKSFTCSFSLAQHQRIH
Alligator_sinensis_CCG005889.1
C2H2 ZF
874
895
QCSECGKSFTHSSHLARHQRIH
Alligator_sinensis_CCG005889.1
C2H2 ZF
901
923
YQCSECGKSFTRSSHLTQHHLIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found