CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG005890.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG005890.1
T133148_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG005890.1
C2H2 ZF
475
496
HQCSVCGKSFTFSFDLAKHQCI
Alligator_sinensis_CCG005890.1
C2H2 ZF
503
525
YGCLECGKSFTRSSNLAQHQLLH
Alligator_sinensis_CCG005890.1
C2H2 ZF
531
548
HPCLECGKSFTQCSHLAR
Alligator_sinensis_CCG005890.1
C2H2 ZF
559
581
HKCLECGKSFTFSSDLARHQRIH
Alligator_sinensis_CCG005890.1
C2H2 ZF
587
609
YQCSECGKSFNCSSNFARHKRIH
Alligator_sinensis_CCG005890.1
C2H2 ZF
615
637
HKCPECGKSFTCASHLTQHQIIH
Alligator_sinensis_CCG005890.1
C2H2 ZF
643
665
HQCPECGKRFAFSSDLAQHQIIH
Alligator_sinensis_CCG005890.1
C2H2 ZF
671
693
YQCSECGKSFNCSSILAQHQRIH
Alligator_sinensis_CCG005890.1
C2H2 ZF
699
720
HLCSACGKSFTCSSDLVQHQCI
Alligator_sinensis_CCG005890.1
C2H2 ZF
727
749
HQCLDCGKSFTFSSDLARHQRIH
Alligator_sinensis_CCG005890.1
C2H2 ZF
755
777
YRCSECGKSFTRSSHLVWHQRIH
Alligator_sinensis_CCG005890.1
C2H2 ZF
783
805
HQCPECGKSFNFSSDLAQHRRIH
Alligator_sinensis_CCG005890.1
C2H2 ZF
811
833
YQCSECEKSFNSSSNLARHQRIH
Alligator_sinensis_CCG005890.1
C2H2 ZF
839
861
YLCSECGKSFTCSSHLTLHWRIH
Alligator_sinensis_CCG005890.1
C2H2 ZF
867
889
HQCSECGKSFTCSSHLTQHRRIH
Alligator_sinensis_CCG005890.1
C2H2 ZF
1067
1088
HRCTECRKNFVSWQDLSQHQCV
Alligator_sinensis_CCG005890.1
C2H2 ZF
1095
1117
HRCTRCGKSFRQPSSLARHWCMH
Alligator_sinensis_CCG005890.1
C2H2 ZF
1123
1145
HKCSECGKSFTCSTNLTQHWLIH
Alligator_sinensis_CCG005890.1
C2H2 ZF
1151
1173
YQCSECGKSFTHSSRLAQHQRIH
Alligator_sinensis_CCG005890.1
C2H2 ZF
1179
1201
HQCSDCGKSFNLSSNLTRHRLTH
Alligator_sinensis_CCG005890.1
C2H2 ZF
1207
1229
YRCSECGKSFTQFSHLVRHWLIH
Alligator_sinensis_CCG005890.1
C2H2 ZF
1235
1257
YQCSECGKSFNQSSSLAQHQRIH
Alligator_sinensis_CCG005890.1
C2H2 ZF
1263
1285
YQCTECGKSFNLSSNLTKHWLIH
Alligator_sinensis_CCG005890.1
C2H2 ZF
1320
1340
CLQCGKSFTQSSSLARHQLIH
Alligator_sinensis_CCG005890.1
C2H2 ZF
1346
1368
HQCSECGKSFKLSSHLTEHRLIH
Alligator_sinensis_CCG005890.1
C2H2 ZF
1374
1396
HQCSECGKSFTRSSHLARHKVVH
Alligator_sinensis_CCG005890.1
C2H2 ZF
1402
1424
HRCSECGKSFAQFSNLTRHQLIH
Alligator_sinensis_CCG005890.1
C2H2 ZF
1430
1452
HQCSECGKSFSQFSNLARHQLVH
Alligator_sinensis_CCG005890.1
C2H2 ZF
1458
1480
FQCSECGKSFAHSSTLSQHHLSH
Alligator_sinensis_CCG005890.1
C2H2 ZF
1486
1508
HQCPECGKSFSRSSNLAKHQLIH
Alligator_sinensis_CCG005890.1
C2H2 ZF
1514
1536
HQCLECGKGFPHSSKLAQHQCIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found