CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG005892.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG005892.1
T133149_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG005892.1
C2H2 ZF
299
321
HRCTRCGKSFKQRFNLARHWCMH
Alligator_sinensis_CCG005892.1
C2H2 ZF
327
349
HKCSECGKSFNLSSSLTQHWLIH
Alligator_sinensis_CCG005892.1
C2H2 ZF
355
377
YQCSECGKSFTHSSRLAQHQRIH
Alligator_sinensis_CCG005892.1
C2H2 ZF
383
405
HQCSECGKSFKLSSNLTRHQLIH
Alligator_sinensis_CCG005892.1
C2H2 ZF
411
433
HRCSECGKSFTCSSNLSQHRLIH
Alligator_sinensis_CCG005892.1
C2H2 ZF
439
461
YQCLECGKSFTHSSHLVQHQRIH
Alligator_sinensis_CCG005892.1
C2H2 ZF
467
489
YRCSECGKSFNLSSNLAKHWLIH
Alligator_sinensis_CCG005892.1
C2H2 ZF
523
543
HQCSECGKSLSSRLVRHQRIH
Alligator_sinensis_CCG005892.1
C2H2 ZF
549
571
YRCSECGKSFNLSSNLAKHWLIH
Alligator_sinensis_CCG005892.1
C2H2 ZF
605
627
HQCSECGKSFTQSSSLAQHQLIH
Alligator_sinensis_CCG005892.1
C2H2 ZF
633
655
FQCSECGKSFKLSSHLTEHRLIH
Alligator_sinensis_CCG005892.1
C2H2 ZF
661
683
HQCSECGKSFTRSSHLARHKVIH
Alligator_sinensis_CCG005892.1
C2H2 ZF
689
711
HRCLECGKSFTQSSNLTRHQLIH
Alligator_sinensis_CCG005892.1
C2H2 ZF
717
739
HQCSECGKSFSQSSNLARHQLVH
Alligator_sinensis_CCG005892.1
C2H2 ZF
745
767
FQCSECGKSFAHSSTLSQHHLSH
Alligator_sinensis_CCG005892.1
C2H2 ZF
773
795
HQCPECGKSFSRSSNLAQHLLIH
Alligator_sinensis_CCG005892.1
C2H2 ZF
801
823
HQCLECGKGFPHFSKLVQHQCVH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found