CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG006576.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG006576.1
T133174_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG006576.1
C2H2 ZF
8
30
HQCSECGKSFTYSSQLAQHQRIH
Alligator_sinensis_CCG006576.1
C2H2 ZF
36
58
FHCSECGRSFTYSSSLGQHQRIH
Alligator_sinensis_CCG006576.1
C2H2 ZF
64
86
HQCSECGKSFTHSSSLAQHQRIH
Alligator_sinensis_CCG006576.1
C2H2 ZF
92
114
YQCSECGKSFPNSFRLAQHQRIH
Alligator_sinensis_CCG006576.1
C2H2 ZF
129
151
HHCSECGKSFSQSYGLAYHQRIH
Alligator_sinensis_CCG006576.1
C2H2 ZF
157
179
YQCLECGKSFILSSTLALHQRIH
Alligator_sinensis_CCG006576.1
C2H2 ZF
185
207
HQCSECGKSFTYSSGLAQHQRIH
Alligator_sinensis_CCG006576.1
C2H2 ZF
213
235
YQCSECGKSFTYPSGLAHHQLLH
Alligator_sinensis_CCG006576.1
C2H2 ZF
241
263
YQCLECGKSFIQSSTLAEHQHIH
Alligator_sinensis_CCG006576.1
C2H2 ZF
269
291
HHCSVCGKRFTYSSSLAQHQHIH
Alligator_sinensis_CCG006576.1
C2H2 ZF
297
319
HQCSVCGKRFTYSSKLAQHQRIH
Alligator_sinensis_CCG006576.1
C2H2 ZF
325
347
HQCSECGKSFAHSSTLAHHQRIH
Alligator_sinensis_CCG006576.1
C2H2 ZF
353
375
HQCSECGKSFAHSSTLAHHQRIH
Alligator_sinensis_CCG006576.1
C2H2 ZF
381
403
HQCSECGKSFTQSSHLSRHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found