CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG006642.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG006642.1
T133178_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG006642.1
C2H2 ZF
222
246
CCCTECKKNFICWQDLSQHQSVWHH
Alligator_sinensis_CCG006642.1
C2H2 ZF
273
295
HQCSECGKSFILSSNLTKHRLIH
Alligator_sinensis_CCG006642.1
C2H2 ZF
301
323
HQCLECGKSFKQSSDLARHQIIH
Alligator_sinensis_CCG006642.1
C2H2 ZF
329
351
YHCFECGKSFNRSCNLTQHQLIH
Alligator_sinensis_CCG006642.1
C2H2 ZF
357
379
YQCSECGKSFNRSCNLAQHQLIH
Alligator_sinensis_CCG006642.1
C2H2 ZF
385
407
HQCSECGKSFDRSSSLAQHQLIH
Alligator_sinensis_CCG006642.1
C2H2 ZF
413
435
HQCSECGESFTTSFYLTKHQFVH
Alligator_sinensis_CCG006642.1
C2H2 ZF
443
463
CSECGKSFKQSSDLARHQIIH
Alligator_sinensis_CCG006642.1
C2H2 ZF
469
491
HQCSVCGKSFNRSCNLAQHQMIH
Alligator_sinensis_CCG006642.1
C2H2 ZF
497
519
HQCSECEKSFTRSSSLARHHLMH
Alligator_sinensis_CCG006642.1
C2H2 ZF
525
547
HQCLECGKSFILLSNLTKHRLIH
Alligator_sinensis_CCG006642.1
C2H2 ZF
555
575
CSECGKSFNQSSDLARHQVIH
Alligator_sinensis_CCG006642.1
C2H2 ZF
581
603
YHCLECGKSFKQSSDLARHQVIH
Alligator_sinensis_CCG006642.1
C2H2 ZF
609
631
YHCLECGKSFNRSCNLAQHQLIH
Alligator_sinensis_CCG006642.1
C2H2 ZF
637
659
HQCSECGKSFNRSFSLAQHQRIH
Alligator_sinensis_CCG006642.1
C2H2 ZF
665
687
YQCLECGKCFTTSSYLSRHQVIH
Alligator_sinensis_CCG006642.1
C2H2 ZF
693
715
HRCSECGKSFKQYSDLAGHQGIH
Alligator_sinensis_CCG006642.1
C2H2 ZF
721
743
YHCLECGKSFNRSSHLARHHLIH
Alligator_sinensis_CCG006642.1
C2H2 ZF
749
771
HRCSECAKSFKQFSDLAQHQTIH
Alligator_sinensis_CCG006642.1
C2H2 ZF
777
799
HQCSECGKCFLHSSKLAQHQCIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found