CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG006934.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG006934.1
T133185_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG006934.1
C2H2 ZF
249
271
HQCRECGQGLESWAQLAEHRRLH
Alligator_sinensis_CCG006934.1
C2H2 ZF
277
299
LACGDCGKAFSSKGNLARHRQLH
Alligator_sinensis_CCG006934.1
C2H2 ZF
307
327
CGECGRRFRTRQACLSHQRVH
Alligator_sinensis_CCG006934.1
C2H2 ZF
333
355
FTCPDCPKSFARKENLVRHRSTH
Alligator_sinensis_CCG006934.1
C2H2 ZF
361
383
HACPDCGKSYVHEGNLVRHRDTH
Alligator_sinensis_CCG006934.1
C2H2 ZF
596
617
LICGACGRSFEDAAALSTHLCQ
Alligator_sinensis_CCG006934.1
C2H2 ZF
626
647
HVCQACGKVFRHRRNLLTHKKR
Alligator_sinensis_CCG006934.1
C2H2 ZF
675
697
FACPRCDRRFSWKESLLIHQRSH
Alligator_sinensis_CCG006934.1
C2H2 ZF
703
725
HRCPDCGRGFSRSGNLRAHQRVH
Alligator_sinensis_CCG006934.1
C2H2 ZF
731
753
FACPECDRTFCNKANLVAHQKLH
Alligator_sinensis_CCG006934.1
C2H2 ZF
1119
1141
FACPECGKRFQHRGNLVTHLRVH
Alligator_sinensis_CCG006934.1
C2H2 ZF
1147
1169
FTCGVCGKSFSQKGDLMRHQRIH
Alligator_sinensis_CCG006934.1
C2H2 ZF
1175
1197
FACGVCGKSFCSKQTFVLHQRIH
Alligator_sinensis_CCG006934.1
C2H2 ZF
1203
1225
FACGDCGKRFNRKANFLTHQKIH
Alligator_sinensis_CCG006934.1
C2H2 ZF
1231
1253
FVCPQCGKGFCAKKTFLLHQKIH
Alligator_sinensis_CCG006934.1
C2H2 ZF
1259
1281
FGCSQCGKSFSRNGDLTRHQRIH
Alligator_sinensis_CCG006934.1
C2H2 ZF
1287
1309
FACDDCGKSFSHNGELIKHRRIH
Alligator_sinensis_CCG006934.1
C2H2 ZF
1315
1337
FGCDLCGKSFNRKGTLVTHQRIH
Alligator_sinensis_CCG006934.1
C2H2 ZF
1343
1365
YACPDCGKTFNLKTTLMKHTRIH
Alligator_sinensis_CCG006934.1
C2H2 ZF
1371
1393
FPCSVCGKSFKYKGNLRTHHLTH
Alligator_sinensis_CCG006934.1
C2H2 ZF
1399
1421
YPCTECGRVFSRKKELAAHQSAH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found