CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG007156.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG007156.1
T133192_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG007156.1
C2H2 ZF
285
307
HHCTKCGKRFRQLFNLASHRCMH
Alligator_sinensis_CCG007156.1
C2H2 ZF
313
335
LQCLECGKTFAYISQLARHQRIH
Alligator_sinensis_CCG007156.1
C2H2 ZF
341
363
HQCLECGKSFANSSGLAQHHRIH
Alligator_sinensis_CCG007156.1
C2H2 ZF
369
391
YQCSECGKSFTYSSSLAQHQRIH
Alligator_sinensis_CCG007156.1
C2H2 ZF
397
419
HQCSKCGKSFTLSSSLAQHQRIH
Alligator_sinensis_CCG007156.1
C2H2 ZF
425
447
HQCLECGKTFSQSSSLAQHQRIH
Alligator_sinensis_CCG007156.1
C2H2 ZF
453
475
HHCSKCGKSFTQSCSLARHQRTH
Alligator_sinensis_CCG007156.1
C2H2 ZF
481
503
RQCSEHGKSFANSRSLDQHQRIH
Alligator_sinensis_CCG007156.1
C2H2 ZF
508
530
HQCSECGKNFTQSYSLARHQRIH
Alligator_sinensis_CCG007156.1
C2H2 ZF
536
558
HQCSDCGKSFSQSSSLAQHQRIH
Alligator_sinensis_CCG007156.1
C2H2 ZF
564
586
HQCSDCGKSFTQSSTLAQHQLVH
Alligator_sinensis_CCG007156.1
C2H2 ZF
592
614
HQCSVCAKSFTYSFNLAQHQRIH
Alligator_sinensis_CCG007156.1
C2H2 ZF
620
642
YQCSECGKSFTHSSSRTHHQLIH
Alligator_sinensis_CCG007156.1
C2H2 ZF
676
698
HQCSECGKSFTQSSHLSRHQLIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found