CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG007228.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG007228.1
T133199_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG007228.1
C2H2 ZF
538
560
YHCTECWQSFTRWDYLRAHLRVH
Alligator_sinensis_CCG007228.1
C2H2 ZF
566
588
FLCTQCGKSFTESSLLTKHQRIH
Alligator_sinensis_CCG007228.1
C2H2 ZF
594
616
FSCTQCGKRFTHRSTLRNHLRVH
Alligator_sinensis_CCG007228.1
C2H2 ZF
622
644
YHCPECEKSFTRWDHLQAHMCVH
Alligator_sinensis_CCG007228.1
C2H2 ZF
650
672
FSCTQCGKSFTQNSALTQHQRVH
Alligator_sinensis_CCG007228.1
C2H2 ZF
678
700
FSCSQCGKSFARRYYLHVHMHVH
Alligator_sinensis_CCG007228.1
C2H2 ZF
734
756
FSCSQCGKSFTRNSTLTKHLRVH
Alligator_sinensis_CCG007228.1
C2H2 ZF
762
784
FSCTHCGKSFSRQDHLQSHLRVH
Alligator_sinensis_CCG007228.1
C2H2 ZF
790
812
FSCTQCGKSFTERSTLTQHLRVH
Alligator_sinensis_CCG007228.1
C2H2 ZF
818
840
FSCKECGKSFTRSSTLTAHQRVH
Alligator_sinensis_CCG007228.1
C2H2 ZF
846
868
YRCAQCGKCFHTSSTLTKHHQSH
Alligator_sinensis_CCG007228.1
C2H2 ZF
1239
1261
YPCTECGASFQNKYHLIRHQRMH
Alligator_sinensis_CCG007228.1
C2H2 ZF
1295
1317
YCCAKCRKSFTRWDNLWAHMRVH
Alligator_sinensis_CCG007228.1
C2H2 ZF
1323
1345
FSCGQCGKSFSQSSTLTQHLRVH
Alligator_sinensis_CCG007228.1
C2H2 ZF
1351
1373
FSCSQCEKSFTDRSNLIRHVRVH
Alligator_sinensis_CCG007228.1
C2H2 ZF
1379
1401
FSCTQCGKSFSDSSTLTRHRRVH
Alligator_sinensis_CCG007228.1
C2H2 ZF
1407
1429
FSCSQCGKSFSKSSTLSTHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found