CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG007693.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG007693.1
T133208_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG007693.1
C2H2 ZF
48
70
YSCSICQKTFKHLSELSRHERIH
Alligator_sinensis_CCG007693.1
C2H2 ZF
76
98
YKCTLCDKSFSQSSHLVHHKRTH
Alligator_sinensis_CCG007693.1
C2H2 ZF
104
126
YKCTVCEKTFKHRSHLVRHMYAH
Alligator_sinensis_CCG007693.1
C2H2 ZF
132
153
FKCNVCELHFKESSELLHHQCT
Alligator_sinensis_CCG007693.1
C2H2 ZF
160
182
FRCGECQKSFKRPSDLRQHERTH
Alligator_sinensis_CCG007693.1
C2H2 ZF
188
210
FKCDLCQMSFKQQYALMRHRRTH
Alligator_sinensis_CCG007693.1
C2H2 ZF
216
238
FKCSLCEKGFVQPSHLVYHQHVH
Alligator_sinensis_CCG007693.1
C2H2 ZF
244
265
FKCNVCQKGFNQSSELLRHKCV
Alligator_sinensis_CCG007693.1
C2H2 ZF
272
294
FKCTVCNKSYKRSSALQKHQLSH
Alligator_sinensis_CCG007693.1
C2H2 ZF
300
321
LKCTLCERRFFSSSEFVQHRCD
Alligator_sinensis_CCG007693.1
C2H2 ZF
328
350
LKCPDCEKRFKYASDLQRHRRVH
Alligator_sinensis_CCG007693.1
C2H2 ZF
356
378
YKCPSCEKAFKQREHLNKHHSVH
Alligator_sinensis_CCG007693.1
C2H2 ZF
384
406
YKCMWCGERFLDLGLLQEHSVQH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found