CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG008716.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG008716.1
T133228_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG008716.1
C2H2 ZF
108
130
HRCSECGKSFTWSSSLARHQLVH
Alligator_sinensis_CCG008716.1
C2H2 ZF
136
158
HPCSECGKCFTFSSSLAQHQSIH
Alligator_sinensis_CCG008716.1
C2H2 ZF
165
186
QCLQCGKSFNQSTDLAKHCLIH
Alligator_sinensis_CCG008716.1
C2H2 ZF
192
214
HQCSECGKNFTYSSGLAQHKHIH
Alligator_sinensis_CCG008716.1
C2H2 ZF
220
242
HQCSECGKNFTYSSGLAQHKHIH
Alligator_sinensis_CCG008716.1
C2H2 ZF
248
270
HQCSECGKNFTYSSGLAQHKHIH
Alligator_sinensis_CCG008716.1
C2H2 ZF
276
298
HQCSECGKNFTYSSGLAQHKHIH
Alligator_sinensis_CCG008716.1
C2H2 ZF
304
326
HQCSECGKNFTYSSGLAQHKHIH
Alligator_sinensis_CCG008716.1
C2H2 ZF
332
354
HQCSECEKSFTYYSRLAEHQRVH
Alligator_sinensis_CCG008716.1
C2H2 ZF
360
382
YRCSECGKSFARSSKLVWHQRVH
Alligator_sinensis_CCG008716.1
C2H2 ZF
388
410
HQCSECGKSFTYSSTLSQHQLIH
Alligator_sinensis_CCG008716.1
C2H2 ZF
416
438
HRCLECGRSFTWSSSLVRHQLIH
Alligator_sinensis_CCG008716.1
C2H2 ZF
444
466
HQCSKCGKCFTLSSSLAEHQHIH
Alligator_sinensis_CCG008716.1
C2H2 ZF
472
494
YRCTECGKSFTRSSKLAWHQRIH
Alligator_sinensis_CCG008716.1
C2H2 ZF
500
522
YRCTECGKSFNQSSNLAKHRLIH
Alligator_sinensis_CCG008716.1
C2H2 ZF
528
545
YQCLECGKRFTQSYRLAQ
Alligator_sinensis_CCG008716.1
C2H2 ZF
556
577
HPCSKCGKCFLHSSELALHQCM
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found