CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG010920.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG010920.1
T133267_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG010920.1
C2H2 ZF
325
347
HQCSECGKTIAYSSHLARHHTSH
Alligator_sinensis_CCG010920.1
C2H2 ZF
359
381
YQCSECGKSFGQSQNLAHHQRTH
Alligator_sinensis_CCG010920.1
C2H2 ZF
387
409
YHCSVCGKKFNSSSDLAFHQLIH
Alligator_sinensis_CCG010920.1
C2H2 ZF
425
447
YHCSECGKRFISSSSLAKHQHIH
Alligator_sinensis_CCG010920.1
C2H2 ZF
453
475
YHCSECGKRFSSSFTLANHQRIH
Alligator_sinensis_CCG010920.1
C2H2 ZF
481
503
YHCSECGKRFTNSSNLVNHKRIH
Alligator_sinensis_CCG010920.1
C2H2 ZF
509
531
YHCSECGKSFAQSGNLAHHQRIH
Alligator_sinensis_CCG010920.1
C2H2 ZF
536
559
PCWCCECGERFISSSTLASHQRIH
Alligator_sinensis_CCG010920.1
C2H2 ZF
564
587
PCWCCECGERFTNSSTLANHQRIH
Alligator_sinensis_CCG010920.1
C2H2 ZF
593
615
YRCCECGERFTNSSTLANHQRIH
Alligator_sinensis_CCG010920.1
C2H2 ZF
621
643
YRCSECGKGFTRSSYLAQHQRIH
Alligator_sinensis_CCG010920.1
C2H2 ZF
649
671
HQCSVCGKSFARSSYLALHQHLH
Alligator_sinensis_CCG010920.1
C2H2 ZF
677
699
YQCSVCGKNFNFSSQLALHQRIH
Alligator_sinensis_CCG010920.1
C2H2 ZF
705
727
HQCSVCGKSFTRSSTLVQHKRVH
Alligator_sinensis_CCG010920.1
C2H2 ZF
733
755
HQCSVCGKRFTRSSHLARHKCIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found