CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG014257.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG014257.1
T133316_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG014257.1
C2H2 ZF
489
506
HQCFECGESFTFSSGLIQ
Alligator_sinensis_CCG014257.1
C2H2 ZF
545
567
HRCSKCGKSFAQSSTLAKHKCIH
Alligator_sinensis_CCG014257.1
C2H2 ZF
573
595
YQCSECGKSFTFSSSLAQHQLIH
Alligator_sinensis_CCG014257.1
C2H2 ZF
601
623
YHCLQCGKRFTQSSHLAQHQLIH
Alligator_sinensis_CCG014257.1
C2H2 ZF
655
677
YWCSECGKSFTRSSHLIRHQTVH
Alligator_sinensis_CCG014257.1
C2H2 ZF
683
705
HRCSECGKSFTRSSNLIRHQIVH
Alligator_sinensis_CCG014257.1
C2H2 ZF
713
733
CSECGKSFAQSSTLAKHKCIH
Alligator_sinensis_CCG014257.1
C2H2 ZF
738
760
HRCSECGKSFTFSSNLAQHQLIH
Alligator_sinensis_CCG014257.1
C2H2 ZF
766
788
YHCLQCGKRFTQSSHLAQHQLIH
Alligator_sinensis_CCG014257.1
C2H2 ZF
794
816
YWCSECGRSFTRSSHLIRHQIVH
Alligator_sinensis_CCG014257.1
C2H2 ZF
822
844
HRCSECGKSFTRSSHLIQHQLIH
Alligator_sinensis_CCG014257.1
C2H2 ZF
850
872
HRCSECGKSFTRSSHLIRHRLIH
Alligator_sinensis_CCG014257.1
C2H2 ZF
878
900
HRCLKCGKSFIRSSELVRHYRIH
Alligator_sinensis_CCG014257.1
C2H2 ZF
906
928
HQCSVCGKCFTCSSYLAQHRLIH
Alligator_sinensis_CCG014257.1
C2H2 ZF
934
956
HQCSECGKSFIRFCRLIQHQTIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found