CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG015040.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG015040.1
T133334_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG015040.1
C2H2 ZF
150
172
HPCTMCGESFQYKCHLVEHQRMH
Alligator_sinensis_CCG015040.1
C2H2 ZF
178
200
HPCHECGKRFSRLFQLQVHLRIH
Alligator_sinensis_CCG015040.1
C2H2 ZF
206
228
HLCPDCGKSFTRRDGLRVHRRIH
Alligator_sinensis_CCG015040.1
C2H2 ZF
234
256
HRCTQCGKSFDCPSRLRVHGRVH
Alligator_sinensis_CCG015040.1
C2H2 ZF
262
284
YRCPECEKSFTNQSRLRDHQRLH
Alligator_sinensis_CCG015040.1
C2H2 ZF
290
312
HHCADCGKGFAYLSRLRDHQRVH
Alligator_sinensis_CCG015040.1
C2H2 ZF
318
340
FCCAQCGKRFTQSSAIAKHQLIH
Alligator_sinensis_CCG015040.1
C2H2 ZF
346
368
HRCAQCGKRFRQSSALTKHQLIH
Alligator_sinensis_CCG015040.1
C2H2 ZF
374
396
YPCMQCGKRFAESSALTTHQHVH
Alligator_sinensis_CCG015040.1
C2H2 ZF
402
424
HHCTHCGKRFASTSALNKHRRSH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found