CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG016755.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG016755.1
T133366_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG016755.1
C2H2 ZF
327
349
HLCTKCGKSFTCLSTLAAHRKIH
Alligator_sinensis_CCG016755.1
C2H2 ZF
383
405
YHCVTCGKTFTRFFSLAQHRRIH
Alligator_sinensis_CCG016755.1
C2H2 ZF
411
433
YQCSECGKRFSVSSSLTKHQRIH
Alligator_sinensis_CCG016755.1
C2H2 ZF
439
461
HQCSQCGKSFTQFSSLAYHQRIH
Alligator_sinensis_CCG016755.1
C2H2 ZF
467
489
HQCSQCGKTFRGSSSLTRHQRVH
Alligator_sinensis_CCG016755.1
C2H2 ZF
495
517
HHCSVCGKSFNNSFSLANHQRIH
Alligator_sinensis_CCG016755.1
C2H2 ZF
523
545
HQCFVCGKSYTQSSHLAQHERLH
Alligator_sinensis_CCG016755.1
C2H2 ZF
551
573
HQCSECEKSFIDSFSLARHQRIH
Alligator_sinensis_CCG016755.1
C2H2 ZF
579
601
HQCSECGKSFRESFSLTKHLRIH
Alligator_sinensis_CCG016755.1
C2H2 ZF
607
629
HQCSVCGKSFTHSSSLAYHQRIH
Alligator_sinensis_CCG016755.1
C2H2 ZF
635
657
HQCSVCGKSFRGSSSLTRHQRVH
Alligator_sinensis_CCG016755.1
C2H2 ZF
663
685
YHCSVCGKSFTHSFSLANHQRIH
Alligator_sinensis_CCG016755.1
C2H2 ZF
691
713
HQCSECGKSFTQSFSLANHQRIH
Alligator_sinensis_CCG016755.1
C2H2 ZF
719
741
HQCSECGKSFTQSSSLTNHQRIH
Alligator_sinensis_CCG016755.1
C2H2 ZF
747
769
HQCSECGKSFTQASSLASHQRIH
Alligator_sinensis_CCG016755.1
C2H2 ZF
775
797
HQCSVCGMSYAQSSNLARHQRKH
Alligator_sinensis_CCG016755.1
C2H2 ZF
803
825
YQCCECGKRFCESSSLDRHQRLH
Alligator_sinensis_CCG016755.1
C2H2 ZF
831
853
HCCCVCGKIFTRSSHLVIHQHIH
Alligator_sinensis_CCG016755.1
C2H2 ZF
859
881
YKCSKCGKIFTQSSSLAQHQCIH
Alligator_sinensis_CCG016755.1
C2H2 ZF
887
909
YQCSECGKSFTRSYHLARHQPIH
Alligator_sinensis_CCG016755.1
C2H2 ZF
915
937
HHCSICRKSFTDSSGLAIHQRVH
Alligator_sinensis_CCG016755.1
C2H2 ZF
943
965
HQCSECGKSFTQSSNLARHQRIH
Alligator_sinensis_CCG016755.1
C2H2 ZF
971
993
HQCLECGKNFTQSTHLARHQLIH
Alligator_sinensis_CCG016755.1
C2H2 ZF
999
1021
HRCSECGKRFAHSYHLAIHQRIH
Alligator_sinensis_CCG016755.1
C2H2 ZF
1027
1044
HQCSECGKRFTHSSSLVI
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found