CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG017995.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG017995.1
T133388_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG017995.1
C2H2 ZF
213
235
HLCPVCLRAFLYLSDLERHSITH
Alligator_sinensis_CCG017995.1
C2H2 ZF
241
263
HVCRACGKAFKRTSHLERHKHIH
Alligator_sinensis_CCG017995.1
C2H2 ZF
269
291
FRCSVCQKGFRESGELLRHQRVH
Alligator_sinensis_CCG017995.1
C2H2 ZF
297
320
FQCPLCRLRFTERNTLRRHAKRKH
Alligator_sinensis_CCG017995.1
C2H2 ZF
551
573
FPCGVCQKSFKQSSHLVQHMLVH
Alligator_sinensis_CCG017995.1
C2H2 ZF
579
601
YECSTCGRTYNHISSLIRHRRCH
Alligator_sinensis_CCG017995.1
C2H2 ZF
659
681
FTCSLCWKVFKKPSHLHQHQIIH
Alligator_sinensis_CCG017995.1
C2H2 ZF
687
709
FSCSVCEKSFNRRESLKRHIKTH
Alligator_sinensis_CCG017995.1
C2H2 ZF
715
737
VPCGVCGKEFRDASYLLKHQATH
Alligator_sinensis_CCG017995.1
C2H2 ZF
744
766
YKCDICGKAYAAPQSLLRHRQVH
Alligator_sinensis_CCG017995.1
C2H2 ZF
825
847
FCCGICGRGFGRRETLKRHERIH
Alligator_sinensis_CCG017995.1
C2H2 ZF
853
875
HQCSVCGKRFRESFHLTKHHVVH
Alligator_sinensis_CCG017995.1
C2H2 ZF
881
903
YKCDMCGKVFGYPQSLTRHKQIH
Alligator_sinensis_CCG017995.1
C2H2 ZF
923
945
YGCSDCGERFPDLFHVMNHKEVH
Alligator_sinensis_CCG017995.1
C2H2 ZF
951
973
YACDACGKCFGFIENLMWHKLVH
Alligator_sinensis_CCG017995.1
C2H2 ZF
1032
1054
FSCSICGQSFKHFLGLVTHKYVH
Alligator_sinensis_CCG017995.1
C2H2 ZF
1060
1082
LACNVCGQSFAGAYDLLLHRRTH
Alligator_sinensis_CCG017995.1
C2H2 ZF
1088
1110
FTCSVCGKRFWEAALLMRHQRCH
Alligator_sinensis_CCG017995.1
C2H2 ZF
1116
1138
YRCTVCGRGFLRSWYLRQHKVVH
Alligator_sinensis_CCG017995.1
C2H2 ZF
1144
1166
YKCALCNKRFAQSSSLSEHQRLH
Alligator_sinensis_CCG017995.1
C2H2 ZF
1172
1194
QRCQTCGKTFRYRSNLLEHQRVH
Alligator_sinensis_CCG017995.1
C2H2 ZF
1200
1222
YRCDLCSKSFFYLSSILRHQRSH
Alligator_sinensis_CCG017995.1
C2H2 ZF
1228
1250
LRCSACLKLFKDPKYFSKHLQTH
Alligator_sinensis_CCG017995.1
C2H2 ZF
1256
1278
FKCSTCGEAFGNTYGLKKHRHIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found