CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZFA61_CONSTRUCT
(
PBM CONSTRUCTS
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ZFA61_CONSTRUCT
T137754_2.00
HughesLab (2013-Jun-13)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFA61_CONSTRUCT
M00957_2.00
PBM CONSTRUCTS
ATGATCAT
ATGATCAT
PBM
Lam et al.(2011)
pTH5572
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00957_2.00
C2H2 ZF
8
30
YKCPECGKSFSTSGNLVRHQRTH
M00957_2.00
C2H2 ZF
36
58
YKCPECGKSFSDPGALVRHQRTH
M00957_2.00
C2H2 ZF
64
86
YKCPECGKSFSERSHLREHQRTH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ZFA61_CONSTRUCT
C2H2 ZF
8
30
YKCPECGKSFSTSGNLVRHQRTH
ZFA61_CONSTRUCT
C2H2 ZF
36
58
YKCPECGKSFSDPGALVRHQRTH
ZFA61_CONSTRUCT
C2H2 ZF
64
86
YKCPECGKSFSERSHLREHQRTH
Links
Other
C2H2 ZF
family TFs
Other
PBM CONSTRUCTS
TFs
0 Related TFs
">No related TF found