CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_110191
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_110191
T138579_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_110191
C2H2 ZF
21
43
HKCTYCDKKFPFKSRLNQHLRSH
estExt_fgenesh2_pg.C_110191
C2H2 ZF
49
71
YQCDECGKRFNHLGNLKAHMRLH
estExt_fgenesh2_pg.C_110191
C2H2 ZF
77
99
HTCEHCNKGFSQASYLKRHVRIH
estExt_fgenesh2_pg.C_110191
C2H2 ZF
123
145
HKCSHCDKEFPFKSKLNRHLRTH
estExt_fgenesh2_pg.C_110191
C2H2 ZF
151
173
YICGECGKRCSQLGDLRRHMVTH
estExt_fgenesh2_pg.C_110191
C2H2 ZF
179
201
YQCDECGERFSRLSILKDHMRTH
estExt_fgenesh2_pg.C_110191
C2H2 ZF
207
229
YRCQECSTQFSRLSYVKRHMRLH
estExt_fgenesh2_pg.C_110191
C2H2 ZF
235
257
YQCQECGTQVSRLCDLKVHMRTH
estExt_fgenesh2_pg.C_110191
C2H2 ZF
263
285
YKCEHCNKCFSQSTNFKVHMRTH
estExt_fgenesh2_pg.C_110191
C2H2 ZF
291
313
YRCEKCSKQFATLSNLKRHIRTH
estExt_fgenesh2_pg.C_110191
C2H2 ZF
319
341
YKCKTCGKQSSDLVDLKKHMRTH
estExt_fgenesh2_pg.C_110191
C2H2 ZF
347
369
HKCEVCDKKFCELGSLKRHKRTH
estExt_fgenesh2_pg.C_110191
C2H2 ZF
375
397
HKCEVRDKKFCELGSLKRHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found