CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_110260
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_110260
T138581_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_110260
C2H2 ZF
10
32
YKCDQCDYSAAQKGHLDHHMRKH
estExt_fgenesh2_pg.C_110260
C2H2 ZF
38
60
FKCDQCDYSAAQKCNLDQHMRKH
estExt_fgenesh2_pg.C_110260
C2H2 ZF
66
89
YKCDLCDYSAAKKGSLDHHIMRKH
estExt_fgenesh2_pg.C_110260
C2H2 ZF
95
117
YKCEQCDYSTVRKSDVDHHMAKH
estExt_fgenesh2_pg.C_110260
C2H2 ZF
620
643
YLCDECEFRTAHRSALAKHKRIKH
estExt_fgenesh2_pg.C_110260
C2H2 ZF
649
671
YKCDQCNYTAPRKSYLDQHKLRH
estExt_fgenesh2_pg.C_110260
C2H2 ZF
677
699
HLCWECGYRTSNRSGLNKHMRTH
estExt_fgenesh2_pg.C_110260
C2H2 ZF
705
727
YKCDQCNYCAAQKGKLDRHKLTH
estExt_fgenesh2_pg.C_110260
C2H2 ZF
733
755
YMCEECGFRTAHRATLTIHKRKH
estExt_fgenesh2_pg.C_110260
C2H2 ZF
761
781
YKCDQCDYSTRAKNNLNKHMA
estExt_fgenesh2_pg.C_110260
C2H2 ZF
868
889
SVCGECGYRAARSHLVIHMRKH
estExt_fgenesh2_pg.C_110260
C2H2 ZF
895
917
YKCDQCDYSTARKSNLNKHMARH
estExt_fgenesh2_pg.C_110260
C2H2 ZF
923
945
YVCGECGYRTDTRSHLAQHESKH
estExt_fgenesh2_pg.C_110260
C2H2 ZF
979
1001
YMCKDCGFRASYRSTLTKHMRTH
estExt_fgenesh2_pg.C_110260
C2H2 ZF
1032
1054
YMCGECGYRTAVRSDLARHKVKH
estExt_fgenesh2_pg.C_110260
C2H2 ZF
1088
1110
YMCKDCGFRASYRSTLTKHMRTH
estExt_fgenesh2_pg.C_110260
C2H2 ZF
1141
1163
YMCGECGYRTAVRSDLARHKVKH
estExt_fgenesh2_pg.C_110260
C2H2 ZF
1197
1219
YMCGECGYRTAYRSTLTKHMARH
estExt_fgenesh2_pg.C_110260
C2H2 ZF
1225
1247
FKCDQCDYSAALKGSLAQHKDRH
estExt_fgenesh2_pg.C_110260
C2H2 ZF
1257
1279
HKCDQCDYSTARKSDLERHMANH
estExt_fgenesh2_pg.C_110260
C2H2 ZF
1285
1307
YMCGKCGYRAAQKTQLSRHMRNH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found