CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_110262
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_110262
T138583_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_110262
C2H2 ZF
18
40
HRCDHCGYRAAYKSKLTSHMRKH
estExt_fgenesh2_pg.C_110262
C2H2 ZF
50
72
FMCGECGYRVAYKSHLIRHMRRH
estExt_fgenesh2_pg.C_110262
C2H2 ZF
78
100
FKCDQCDYSAVQKASLDHHMRKH
estExt_fgenesh2_pg.C_110262
C2H2 ZF
117
139
HSCDQCGYRVGYKSQLIRHMRTH
estExt_fgenesh2_pg.C_110262
C2H2 ZF
145
167
YKCDQCDYSAALKGSLDHHKRKH
estExt_fgenesh2_pg.C_110262
C2H2 ZF
173
196
FKCDQCDYSAVRKGDLDIHIMAKH
estExt_fgenesh2_pg.C_110262
C2H2 ZF
202
224
YMCGECGYRTEYRYSLTQHMRTH
estExt_fgenesh2_pg.C_110262
C2H2 ZF
230
252
YKCDQCDYSAALKGSLIYHMRKH
estExt_fgenesh2_pg.C_110262
C2H2 ZF
286
308
FMCGRCGYKTDNRFHLSEHMKKH
estExt_fgenesh2_pg.C_110262
C2H2 ZF
435
457
HRCDQCGYRTPYKSQLIRHMRKH
estExt_fgenesh2_pg.C_110262
C2H2 ZF
463
485
FKCDQCDYSAALKGSLDHHMRKH
estExt_fgenesh2_pg.C_110262
C2H2 ZF
491
513
YKCDQCDYSTVRKGDLDIHMAKH
estExt_fgenesh2_pg.C_110262
C2H2 ZF
519
541
YMCGECGYRTEYKNCLTLHMRRH
estExt_fgenesh2_pg.C_110262
C2H2 ZF
547
569
YKCDQCDYSAAQKIVLTRHMAQH
estExt_fgenesh2_pg.C_110262
C2H2 ZF
575
597
YKCGECDYGTGNKFHLAIHMKKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found