CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_110267
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_110267
T138584_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_110267
C2H2 ZF
10
32
YTCGECEFRTATKGNLTKHLRNH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
38
60
YKCDQCDYVAAWKKNLDQHMTKH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
66
88
YKCGQCEFRAAAKSNLVRHMRKH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
94
116
YMCEKCGFMAAKMSDLSSHMRTH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
122
143
YKCDQCDYSAARKAHLDEHMFS
estExt_fgenesh2_pg.C_110267
C2H2 ZF
266
288
YMCGECGHRTVSMSDLSQHMKKH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
294
316
YKCDQCDYSSAWKKSLVLHMSHH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
322
344
YKCGECEYRTAAKHDLVRHMRKH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
377
399
FLCGECGYMAGDRSDLSKHMKKH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
641
663
YKCDQCDYSAAQKGHLDRHMAKH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
697
719
YKCDQCDYSTLRKCLLDQHMAKH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
725
747
YLCEKCGFRTTNRFCLSSHMTTH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
781
803
HKCEKCEYRTTTRSNLSVHMRQH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
837
859
YACKECGFRTADRSSISRHMTIH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
865
887
YMCEKCGYMAPCRSELSRHMQKH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
897
919
YKCDQCDYSAALKKTLNRHILRH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
927
949
YKCEECEFRTDNRSKMSEHVRTH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
955
977
YKCDLCDYSAARKSTLDQHMTKH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
983
1005
YVCEECGYGTVKKSHLTIHRRKH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
1131
1153
YSCDECDFSSPSKASVKKHKAKH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
1157
1179
FKCGECGYRATVRFHLSEHIRTH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
1185
1207
YKCDQCDYSSAFKSGLNRHMTKH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
1213
1235
YMCGECGYRTARRSTLTVHMREH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
1241
1264
YKCDQCDYSSARKNHLRKHAVEKH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
1298
1320
FMCGECEYRTVARSDLAKHMRKH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
1326
1347
HKCEQCDYSSAPNDDLRKHMFH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
1430
1452
YNCDECDFSSPFRRNLNLHKAKH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
1456
1478
YKCSECEYRTAYRSALSLHMRNH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
1484
1506
YKCGHCNISFKQKKSLDRHLATH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
1512
1534
YTCNKCEYKTADKSGLSQHMKQH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
1568
1590
YLCEKCGFRTANSFCLSNHMTTH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
1596
1618
YKCDQCDFAAGQKPTLQRHKLRH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
1624
1646
YKCGECEYRTITRSNLSVHMRQH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
1652
1674
YKCEHCDYSAAQKGLLNQHMAKH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
1687
1709
FMCEKCGYMAAKKSDLSRHMRKH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
1715
1737
YKCDQCDYSAAQKDTLNRHISTH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
1745
1767
YKCEECDYRTDGRYKLSAHVRKH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
1773
1795
YKCDLCDYSAALRKALNRHILTH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
1803
1825
YKCEECDFRTDGKFKLTEHVRKH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
1831
1853
YKCNICDYSAAWKLSLAAHLRKH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
1859
1881
YKCDLCDYSAAVKRRLDQHMTKH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
1887
1909
YVCEECGYGTVSKSHLTIHLRKH
estExt_fgenesh2_pg.C_110267
C2H2 ZF
1915
1937
YKCDMCDYSAAHANSLKLHKKKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found