CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_120087
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_120087
T138594_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_120087
C2H2 ZF
43
65
HKCAQCDFSTAYKCEFSIHMLQH
estExt_fgenesh2_pg.C_120087
C2H2 ZF
71
94
FECKKCGYITTSRSHFKQHSSRSH
estExt_fgenesh2_pg.C_120087
C2H2 ZF
96
118
MKCDECDFSTSEKLKLQEHKRKH
estExt_fgenesh2_pg.C_120087
C2H2 ZF
177
199
FKCDECDFTANEKDDFERHLLEH
estExt_fgenesh2_pg.C_120087
C2H2 ZF
205
227
YKCEECGYETASRSDLICHTRKH
estExt_fgenesh2_pg.C_120087
C2H2 ZF
233
255
FNCDQCDFSTEGKDNLIQHMLQH
estExt_fgenesh2_pg.C_120087
C2H2 ZF
278
302
FNCHKCDFSTTHKQSLKRHLLKVRH
estExt_fgenesh2_pg.C_120087
C2H2 ZF
352
374
YTCNVCGYKTTARSDFSQHFKTH
estExt_fgenesh2_pg.C_120087
C2H2 ZF
380
402
YWCSQCGFSSTDKDSLERHVLRH
estExt_fgenesh2_pg.C_120087
C2H2 ZF
409
430
YGCEQCGYETTKSHELARHTCA
estExt_fgenesh2_pg.C_120087
C2H2 ZF
431
453
FNCDLCDFSTARKFTLARHKLNH
estExt_fgenesh2_pg.C_120087
C2H2 ZF
459
482
HKCQKCGYGASSRFGLSKHLSKHH
estExt_fgenesh2_pg.C_120087
C2H2 ZF
489
511
HKCGQCDFSTERKCNLVQHMAMH
estExt_fgenesh2_pg.C_120087
C2H2 ZF
516
538
YVCEKCGYETTHRFKLAQHMKIH
estExt_fgenesh2_pg.C_120087
C2H2 ZF
572
595
YKCDKCGYGAVSRSLLLKHLRTHH
estExt_fgenesh2_pg.C_120087
C2H2 ZF
603
625
FRCARCDFSTARKCNLVQHMAVH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found