CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_1380084
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_1380084
T138606_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_1380084
C2H2 ZF
346
368
FRCEECSKQFSRRWHLKNHMLIH
estExt_fgenesh2_pg.C_1380084
C2H2 ZF
374
396
FSCKECSRQFREKRDLKRHMTIH
estExt_fgenesh2_pg.C_1380084
C2H2 ZF
402
424
YKCEECSSEFSMPSDLKKHMYAH
estExt_fgenesh2_pg.C_1380084
C2H2 ZF
430
452
YSCEKCSKEFLDRRHLNRHLLTH
estExt_fgenesh2_pg.C_1380084
C2H2 ZF
458
480
FRCEVCSKQFCTRGNLKIHMRTH
estExt_fgenesh2_pg.C_1380084
C2H2 ZF
486
508
YSCEECSKQFSDWSNMQKHKETH
estExt_fgenesh2_pg.C_1380084
C2H2 ZF
514
536
YKCEECSSQFSTPSDLKKHMYTH
estExt_fgenesh2_pg.C_1380084
C2H2 ZF
542
564
YKCEKCSKEFMDLKLLKQHKLTH
estExt_fgenesh2_pg.C_1380084
C2H2 ZF
581
602
YICEECKRKFKTPVDLKSHVCT
estExt_fgenesh2_pg.C_1380084
C2H2 ZF
609
631
FRCEECSKQFSRLANLKRHKSTH
estExt_fgenesh2_pg.C_1380084
C2H2 ZF
637
659
FVCEKCGSQFRLLESLNAHLKTH
estExt_fgenesh2_pg.C_1380084
C2H2 ZF
669
691
YSCKTCQMQFYNQRHLNQHRMLH
estExt_fgenesh2_pg.C_1380084
C2H2 ZF
697
718
YMCDKCSKQFHRKGDLACHLWN
estExt_fgenesh2_pg.C_1380084
C2H2 ZF
725
747
HKCEQCSRQFNKRSDLKRHMKSH
estExt_fgenesh2_pg.C_1380084
C2H2 ZF
752
774
FVCEECCKAFRKLGALKRHQRSH
estExt_fgenesh2_pg.C_1380084
C2H2 ZF
780
803
YRCEVCSQRFIRQYGLTRHINVKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found